RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 DEFB103AP81534 67 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 LRMPQ12912 555 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 SCARA3Q6AZY7 606 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 PHLDB3Q6NSJ2 640 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 ADAMTS19Q8TE59 1207 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 HERVK_113Q902F9 699 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 DDX27Q96GQ7 796 aaKnown RBP13.87□□□□□ -0.19
SPG7-209ENST00000564047 HPDLQ96IR7 371 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 ASB2Q96Q27 587 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 UHRF1Q96T88 793 aaPredicted RBP13.87□□□□□ -0.19
SPG7-209ENST00000564047 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.87□□□□□ -0.198e-17■□□□□ 11.2
SPG7-209ENST00000564047 PI4K2AQ9BTU6 479 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 NAA15Q9BXJ9 866 aaKnown RBP13.87□□□□□ -0.19
SPG7-209ENST00000564047 ZNF576Q9H609 170 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 GOLGA2P5Q9HBQ8 144 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 TBC1D13Q9NVG8 400 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 CAPN11Q9UMQ6 739 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 TET1Q8NFU7 2136 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 ANK1P16157 1881 aa13.87□□□□□ -0.19
SPG7-209ENST00000564047 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.86□□□□□ -0.19
SPG7-209ENST00000564047 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.86□□□□□ -0.19
SPG7-209ENST00000564047 UPP2O95045 317 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 PAX3P23760 479 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 GSDMDP57764 484 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 POLR2FP61218 127 aaKnown RBP13.86□□□□□ -0.19
SPG7-209ENST00000564047 NOP14P78316 857 aaKnown RBP13.86□□□□□ -0.19
SPG7-209ENST00000564047 APBA1Q02410 837 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 GCNT1Q02742 428 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 DSC1Q08554 894 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 MYO1EQ12965 1108 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 ZNF699Q32M78 642 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 SMYD5Q6GMV2 418 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 ENOSF1Q7L5Y1 443 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 CACNA2D4Q7Z3S7 1137 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 ARHGEF19Q8IW93 802 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 TMEM130Q8N3G9 435 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 ZNF397Q8NF99 534 aaPredicted RBP13.86□□□□□ -0.19
SPG7-209ENST00000564047 PPM1EQ8WY54 764 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 TATDN2Q93075 761 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 ZNF560Q96MR9 790 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 MTIF3Q9H2K0 278 aaKnown RBP13.86□□□□□ -0.19
SPG7-209ENST00000564047 APOBEC3GQ9HC16 384 aaKnown RBP13.86□□□□□ -0.19
SPG7-209ENST00000564047 DNAJC12Q9UKB3 198 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 LUC7L2Q9Y383 392 aaKnown RBP13.86□□□□□ -0.19
SPG7-209ENST00000564047 NUB1Q9Y5A7 615 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 FHOD1Q9Y613 1164 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 CHD7Q9P2D1 2997 aa13.86□□□□□ -0.19
SPG7-209ENST00000564047 CITO14578 2027 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 PIEZO1Q92508 2521 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 TBKBP1A7MCY6 615 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 ZBBXA8MT70 800 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 AKR1B15C9JRZ8 316 aaPredicted RBP13.85□□□□□ -0.19
SPG7-209ENST00000564047 PODXLO00592 558 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 PPEF2O14830 753 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 MFAP3LO75121 409 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 DDHD2O94830 711 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 P4HA1P13674 534 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 TBXAS1P24557 533 aaPredicted RBP13.85□□□□□ -0.19
SPG7-209ENST00000564047 CASP14P31944 242 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 TAF6P49848 677 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 GATMP50440 423 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 MFAP3P55082 362 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 MRPS5P82675 430 aaKnown RBP13.85□□□□□ -0.19
SPG7-209ENST00000564047 ZBED6P86452 979 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 RNASELQ05823 741 aaKnown RBP13.85□□□□□ -0.19
SPG7-209ENST00000564047 CUL2Q13617 745 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 ARID5BQ14865 1188 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 UPP1Q16831 310 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 SV2CQ496J9 727 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 ZNF667Q5HYK9 610 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 IQCEQ6IPM2 695 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 SPOPLQ6IQ16 392 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 GJB7Q6PEY0 223 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 CNGA4Q8IV77 575 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 COLGALT2Q8IYK4 626 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 LRRC43Q8N309 656 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 PPM1KQ8N3J5 372 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 PHOSPHO2Q8TCD6 241 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 CPLX3Q8WVH0 158 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 BAP1Q92560 729 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 JAKMIP2Q96AA8 810 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 TIFAQ96CG3 184 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 ZNF689Q96CS4 500 aaPredicted RBP13.85□□□□□ -0.19
SPG7-209ENST00000564047 FAM193BQ96PV7 902 aaPredicted RBP13.85□□□□□ -0.19
SPG7-209ENST00000564047 STK33Q9BYT3 514 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 NIF3L1Q9GZT8 377 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 NUCKS1Q9H1E3 243 aaKnown RBP13.85□□□□□ -0.19
SPG7-209ENST00000564047 UBE2TQ9NPD8 197 aaPredicted RBP13.85□□□□□ -0.19
SPG7-209ENST00000564047 NLRC4Q9NPP4 1024 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.85□□□□□ -0.197e-8■■■■■ 186.3
SPG7-209ENST00000564047 MYO6Q9UM54 1294 aa13.85□□□□□ -0.19
SPG7-209ENST00000564047 TCF20Q9UGU0 1960 aaKnown RBP13.84□□□□□ -0.19
SPG7-209ENST00000564047 CASTOR2A6NHX0 329 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 RNF225M0QZC1 329 aaPredicted RBP13.84□□□□□ -0.19
SPG7-209ENST00000564047 CLSTN1O94985 981 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 KRT9P35527 623 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 CLCNKBP51801 687 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 WDR72Q3MJ13 1102 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 RASIP1Q5U651 963 aa13.84□□□□□ -0.19
SPG7-209ENST00000564047 DCLRE1AQ6PJP8 1040 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms