RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 VCPKMTQ9H867 229 aa5.27□□□□□ -1.57
CDR2-203ENST00000563573 ZNF408Q9H9D4 720 aa5.27□□□□□ -1.57
CDR2-203ENST00000563573 L2HGDHQ9H9P8 463 aa5.27□□□□□ -1.57
CDR2-203ENST00000563573 NMRK2Q9NPI5 230 aa5.27□□□□□ -1.57
CDR2-203ENST00000563573 SH3GLB2Q9NR46 395 aa5.27□□□□□ -1.57
CDR2-203ENST00000563573 CLDND1Q9NY35 253 aa5.27□□□□□ -1.57
CDR2-203ENST00000563573 HSPBP1Q9NZL4 362 aa5.27□□□□□ -1.57
CDR2-203ENST00000563573 TMEFF2Q9UIK5 374 aaPredicted RBP5.27□□□□□ -1.57
CDR2-203ENST00000563573 FEM1BQ9UK73 627 aa5.27□□□□□ -1.57
CDR2-203ENST00000563573 NUB1Q9Y5A7 615 aa5.27□□□□□ -1.57
CDR2-203ENST00000563573 PHIPQ8WWQ0 1821 aa5.27□□□□□ -1.57
CDR2-203ENST00000563573 BAZ2BQ9UIF8 2168 aaKnown RBP5.26□□□□□ -1.57
CDR2-203ENST00000563573 FRMPD2Q68DX3 1309 aaPredicted RBP5.26□□□□□ -1.57
CDR2-203ENST00000563573 A0A1W2PRG0 241 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 TRIM75PA6NK02 468 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 UBE2Q2LH0YL09 131 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 CXCL11O14625 94 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 ZBED4O75132 1171 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 CELF2O95319 508 aaKnown RBP5.26□□□□□ -1.57
CDR2-203ENST00000563573 NDUFB10O96000 172 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 CYP1A1P04798 512 aaPredicted RBP5.26□□□□□ -1.57
CDR2-203ENST00000563573 SCG2P13521 617 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 FDPSP14324 419 aaKnown RBP5.26□□□□□ -1.57
CDR2-203ENST00000563573 PTMSP20962 102 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 GNA11P29992 359 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 DDIT3P35638 169 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 STAT5AP42229 794 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 NLRP5P59047 1200 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 ST3GAL1Q11201 340 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 PABPC4Q13310 644 aaKnown RBP eCLIP5.26□□□□□ -1.57
CDR2-203ENST00000563573 PUM1Q14671 1186 aaKnown RBP eCLIP5.26□□□□□ -1.57
CDR2-203ENST00000563573 SHROOM1Q2M3G4 852 aaPredicted RBP5.26□□□□□ -1.57
CDR2-203ENST00000563573 SYDE2Q5VT97 1194 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 GALNT17Q6IS24 598 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 BTNL9Q6UXG8 535 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 FASTKD5Q7L8L6 764 aaKnown RBP5.26□□□□□ -1.57
CDR2-203ENST00000563573 HOMER1Q86YM7 354 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 ADGRF4Q8IZF3 695 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 PRPF38AQ8NAV1 312 aaKnown RBP5.26□□□□□ -1.57
CDR2-203ENST00000563573 CHST13Q8NET6 341 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 CCDC148Q8NFR7 591 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 FBXO18Q8NFZ0 1043 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 BICD2Q8TD16 824 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 ACER1Q8TDN7 264 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 PIBF1Q8WXW3 757 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 LOXL4Q96JB6 756 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 LGR4Q9BXB1 951 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 TMEM168Q9H0V1 697 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 GLT8D2Q9H1C3 349 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 TMPRSS5Q9H3S3 457 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 JMJD4Q9H9V9 463 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 GBA2Q9HCG7 927 aaPredicted RBP5.26□□□□□ -1.57
CDR2-203ENST00000563573 C6orf50Q9HD87 102 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 HOXC10Q9NYD6 342 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 PNMA2Q9UL42 364 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 FZD1Q9UP38 647 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 AFG3L2Q9Y4W6 797 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 NPFFR2Q9Y5X5 522 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 TCHHQ07283 1943 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 MYH15Q9Y2K3 1946 aa5.26□□□□□ -1.57
CDR2-203ENST00000563573 TCRBV5S2A0A599 114 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 SMCO2A6NFE2 343 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 C1QTNF3-AMACRE9PGA6 284 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 ARNTLO00327 626 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 TRAF5O00463 557 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 ZBTB5O15062 677 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 TBX1O43435 398 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 DTNBO60941 627 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 ZNF28P17035 718 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 NCLP19338 710 aaKnown RBP5.25□□□□□ -1.57
CDR2-203ENST00000563573 KRT2P35908 639 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 SLC16A2P36021 539 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 MRPL12P52815 198 aaKnown RBP5.25□□□□□ -1.57
CDR2-203ENST00000563573 GUCY1B3Q02153 619 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 PPIL2Q13356 520 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 ADAM9Q13443 819 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 VGLL4Q14135 290 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 COG2Q14746 738 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 FAM83BQ5T0W9 1011 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 SLC35F1Q5T1Q4 408 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 KRT40Q6A162 431 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 ATL3Q6DD88 541 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 TEPPQ6URK8 271 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 RSPO2Q6UXX9 243 aaPredicted RBP5.25□□□□□ -1.57
CDR2-203ENST00000563573 DLK2Q6UY11 383 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 GADL1Q6ZQY3 521 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 HEATR3Q7Z4Q2 680 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 BRAPQ7Z569 592 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 STK32CQ86UX6 486 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 SPICE1Q8N0Z3 855 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 TMEM145Q8NBT3 493 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 SMC1BQ8NDV3 1235 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 TNPO1Q92973 898 aaKnown RBP5.25□□□□□ -1.57
CDR2-203ENST00000563573 ZNF396Q96N95 335 aaPredicted RBP5.25□□□□□ -1.57
CDR2-203ENST00000563573 PIGSQ96S52 555 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 NUP88Q99567 741 aaPredicted RBP5.25□□□□□ -1.57
CDR2-203ENST00000563573 AMNQ9BXJ7 453 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 TANGO6Q9C0B7 1094 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 GPR27Q9NS67 375 aa5.25□□□□□ -1.57
CDR2-203ENST00000563573 BARHL2Q9NY43 387 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms