RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 PNMA5Q96PV4 448 aa11.1□□□□□ -0.63
SNX29-202ENST00000563308 PTPRHQ9HD43 1115 aa11.1□□□□□ -0.63
SNX29-202ENST00000563308 FNIP2Q9P278 1114 aa11.1□□□□□ -0.63
SNX29-202ENST00000563308 ARHGAP28Q9P2N2 729 aa11.1□□□□□ -0.63
SNX29-202ENST00000563308 CDH7Q9ULB5 785 aa11.1□□□□□ -0.63
SNX29-202ENST00000563308 SDK1Q7Z5N4 2213 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 ASXL3Q9C0F0 2248 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 CASTOR2A6NHX0 329 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 ABLIM1O14639 778 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 MEFVO15553 781 aaPredicted RBP11.09□□□□□ -0.63
SNX29-202ENST00000563308 TGM5O43548 720 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 HIP1RO75146 1068 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 TADA2AO75478 443 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 THP07101 528 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 MYBP10242 640 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 GJB2P29033 226 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 FZD5Q13467 585 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 HYIQ5T013 277 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 ATF7IP2Q5U623 682 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 TCEAL6Q6IPX3 200 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 RINT1Q6NUQ1 792 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 PRSS55Q6UWB4 352 aaPredicted RBP11.09□□□□□ -0.63
SNX29-202ENST00000563308 DTHD1Q6ZMT9 781 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 WDR5BQ86VZ2 330 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 PALB2Q86YC2 1186 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 CHCHD4Q8N4Q1 142 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 HDAC7Q8WUI4 952 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 GAB3Q8WWW8 586 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 TCEAL3Q969E4 200 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 IFT74Q96LB3 600 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 PPP1R10Q96QC0 940 aaKnown RBP11.09□□□□□ -0.63
SNX29-202ENST00000563308 ACO2Q99798 780 aaKnown RBP11.09□□□□□ -0.63
SNX29-202ENST00000563308 KXD1Q9BQD3 176 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 DNM3Q9UQ16 869 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 GDAQ9Y2T3 454 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 STK24Q9Y6E0 443 aa11.09□□□□□ -0.63
SNX29-202ENST00000563308 TDRD15B5MCY1 1934 aaKnown RBP11.09□□□□□ -0.63
SNX29-202ENST00000563308 FAM221BA6H8Z2 402 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 ENO4A6NNW6 628 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 K7ERI5 159 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 KHNYNO15037 678 aaKnown RBP11.08□□□□□ -0.64
SNX29-202ENST00000563308 ADAM12O43184 909 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 KRT38O76015 456 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 CAVIN2O95810 425 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 PROZP22891 400 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 RAP1GAPP47736 663 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 PEX3P56589 373 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 CREB5Q02930 508 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 LRRC32Q14392 662 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 ELF2Q15723 593 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 DCAF4L1Q3SXM0 396 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 RILPL1Q5EBL4 403 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 XKR4Q5GH76 650 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 KRT79Q5XKE5 535 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 MCTP1Q6DN14 999 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 ALKAL1Q6UXT8 129 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 CEP120Q8N960 986 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 LNX1Q8TBB1 728 aaPredicted RBP11.08□□□□□ -0.64
SNX29-202ENST00000563308 LRRC15Q8TF66 581 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 HASPINQ8TF76 798 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 FAM3CQ92520 227 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 TBC1D32Q96NH3 1257 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 CLSTN3Q9BQT9 956 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 RAB34Q9BZG1 259 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 CDT1Q9H211 546 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 TMEM134Q9H6X4 195 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.08□□□□□ -0.64
SNX29-202ENST00000563308 ZDHHC7Q9NXF8 308 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 TNFSF13BQ9Y275 285 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 PIEZO2Q9H5I5 2752 aa11.08□□□□□ -0.64
SNX29-202ENST00000563308 SF3B1O75533 1304 aaKnown RBP eCLIP11.08□□□□□ -0.649e-7■■■■■ 89.1
SNX29-202ENST00000563308 SMIM28A0A1B0GU29 152 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 CCDC169A6NNP5 214 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 SFI1A8K8P3 1242 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 RHOBTB1O94844 696 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 CAPNS1P04632 268 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 GUCY2CP25092 1073 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 GRM5P41594 1212 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 CFHR1Q03591 330 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 SOX4Q06945 474 aaPredicted RBP11.07□□□□□ -0.64
SNX29-202ENST00000563308 TMEM132AQ24JP5 1023 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 ZNF423Q2M1K9 1284 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 ARSHQ5FYA8 562 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 GLRA4Q5JXX5 417 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 FAM171A1Q5VUB5 890 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 KBTBD6Q86V97 674 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 GLYCTKQ8IVS8 523 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 C3orf58Q8NDZ4 430 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 DNASE1L2Q92874 299 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 ADPGKQ9BRR6 497 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 NTPCRQ9BSD7 190 aaKnown RBP11.07□□□□□ -0.64
SNX29-202ENST00000563308 TTPALQ9BTX7 342 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 TARS2Q9BW92 718 aaKnown RBP11.07□□□□□ -0.64
SNX29-202ENST00000563308 NT5C3AQ9H0P0 336 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 PLEKHA4Q9H4M7 779 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 KIF3AQ9Y496 699 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 TEP1Q99973 2627 aaKnown RBP11.07□□□□□ -0.64
SNX29-202ENST00000563308 WDFY3Q8IZQ1 3526 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 PHLPP2Q6ZVD8 1323 aa11.07□□□□□ -0.64
SNX29-202ENST00000563308 SPAARA0A1B0GVQ0 90 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms