RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 TRAK2O60296 914 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 MOSPD3O75425 235 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 VNN2O95498 520 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 CPB1P15086 417 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 PLCG1P19174 1290 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 SCP2P22307 547 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 LONP1P36776 959 aaKnown RBP17.12■□□□□ 0.33
CLK3-211ENST00000563297 GUCY2FP51841 1108 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 PPP2R3AQ06190 1150 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 KARSQ15046 597 aaKnown RBP17.12■□□□□ 0.33
CLK3-211ENST00000563297 SF3A1Q15459 793 aaKnown RBP17.12■□□□□ 0.33
CLK3-211ENST00000563297 SLC39A4Q6P5W5 647 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 ELMOD1Q8N336 334 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 BEST2Q8NFU1 509 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 RAD54LQ92698 747 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 ZSWIM3Q96MP5 696 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 ASB16Q96NS5 453 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 TSPAN18Q96SJ8 248 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 NELL2Q99435 816 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 RPF1Q9H9Y2 349 aaKnown RBP17.12■□□□□ 0.33
CLK3-211ENST00000563297 UPF2Q9HAU5 1272 aaKnown RBP17.12■□□□□ 0.33
CLK3-211ENST00000563297 ZFP14Q9HCL3 533 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.12■□□□□ 0.33
CLK3-211ENST00000563297 ZNF292O60281 2723 aa17.11■□□□□ 0.33
CLK3-211ENST00000563297 K7ENM7 598 aa17.11■□□□□ 0.33
CLK3-211ENST00000563297 PPEF2O14830 753 aa17.11■□□□□ 0.33
CLK3-211ENST00000563297 XPOTO43592 962 aaKnown RBP17.11■□□□□ 0.33
CLK3-211ENST00000563297 BMP15O95972 392 aa17.11■□□□□ 0.33
CLK3-211ENST00000563297 OR4Q2P0C623 313 aa17.11■□□□□ 0.33
CLK3-211ENST00000563297 EPHA5P54756 1037 aa17.11■□□□□ 0.33
CLK3-211ENST00000563297 FZD5Q13467 585 aa17.11■□□□□ 0.33
CLK3-211ENST00000563297 SPATA1Q5VX52 437 aa17.11■□□□□ 0.33
CLK3-211ENST00000563297 DSTYKQ6XUX3 929 aa17.11■□□□□ 0.33
CLK3-211ENST00000563297 TPRG1Q6ZUI0 275 aa17.11■□□□□ 0.33
CLK3-211ENST00000563297 BRAPQ7Z569 592 aa17.11■□□□□ 0.33
CLK3-211ENST00000563297 CLDN23Q96B33 292 aa17.11■□□□□ 0.33
CLK3-211ENST00000563297 OXCT2Q9BYC2 517 aaPredicted RBP17.11■□□□□ 0.33
CLK3-211ENST00000563297 ZHX3Q9H4I2 956 aa17.11■□□□□ 0.33
CLK3-211ENST00000563297 HEBP1Q9NRV9 189 aa17.11■□□□□ 0.33
CLK3-211ENST00000563297 CPSF3Q9UKF6 684 aaKnown RBP17.11■□□□□ 0.33
CLK3-211ENST00000563297 ANKRD63C9JTQ0 380 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 KRT18P05783 430 aaKnown RBP17.1■□□□□ 0.33
CLK3-211ENST00000563297 MYL4P12829 197 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 GJA1P17302 382 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 TARSP26639 723 aaKnown RBP17.1■□□□□ 0.33
CLK3-211ENST00000563297 NMT1P30419 496 aaKnown RBP17.1■□□□□ 0.33
CLK3-211ENST00000563297 DDIT3P35638 169 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 LILRA4P59901 499 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 GTF2BQ00403 316 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 GPR17Q13304 367 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 JADE1Q6IE81 842 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 ZC3H14Q6PJT7 736 aaKnown RBP17.1■□□□□ 0.33
CLK3-211ENST00000563297 ZNF852Q6ZMS4 543 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 USP37Q86T82 979 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 LARP4BQ92615 738 aaKnown RBP17.1■□□□□ 0.33
CLK3-211ENST00000563297 FAM212AQ96EL1 285 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 MSTO1Q9BUK6 570 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 LRRC3Q9BY71 257 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 CCSER1Q9C0I3 900 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 CRISPLD1Q9H336 500 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 SPATA6Q9NWH7 488 aaPredicted RBP17.1■□□□□ 0.33
CLK3-211ENST00000563297 OTOGLQ3ZCN5 2332 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 ANK1P16157 1881 aa17.1■□□□□ 0.33
CLK3-211ENST00000563297 SCN1AP35498 2009 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 OR6C75A6NL08 312 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 LAMTOR5O43504 91 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 MAGEA9P43362 315 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 DUSP4Q13115 394 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 GRM2Q14416 872 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 ZNF528Q3MIS6 628 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 ZC2HC1CQ53FD0 456 aaPredicted RBP17.09■□□□□ 0.33
CLK3-211ENST00000563297 VITQ6UXI7 678 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 USP49Q70CQ1 688 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 MAP4K3Q8IVH8 894 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 CD302Q8IX05 232 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 LEMD2Q8NC56 503 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 DNASE1L2Q92874 299 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 SMARCD2Q92925 531 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 PGLYRP2Q96PD5 576 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 TRMT61BQ9BVS5 477 aaKnown RBP17.09■□□□□ 0.33
CLK3-211ENST00000563297 BRD9Q9H8M2 597 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 TRPV4Q9HBA0 871 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 ASAH2Q9NR71 780 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 FBXO4Q9UKT5 387 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 YIPF1Q9Y548 306 aa17.09■□□□□ 0.33
CLK3-211ENST00000563297 PIRO00625 290 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 SPTLC1O15269 473 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 NCAM2O15394 837 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 PSMC3P17980 439 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 TYMPP19971 482 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 ABCD1P33897 745 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 VIPR2P41587 438 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 ACOT2P49753 483 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 CUL4AQ13619 759 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 MYBPC2Q14324 1141 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 TEAD2Q15562 447 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 C9orf57Q5W0N0 161 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 OVOS1Q6IE37 1185 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 CENPPQ6IPU0 288 aa17.08■□□□□ 0.32
CLK3-211ENST00000563297 RASSF8Q8NHQ8 419 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms