RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 SLC43A3Q8NBI5 491 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 UBE2Q2Q8WVN8 375 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 HPDLQ96IR7 371 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 BCO2Q9BYV7 579 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 SDCBP2Q9H190 292 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 TRPV6Q9H1D0 765 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 TUBGCP4Q9UGJ1 667 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 CDC23Q9UJX2 597 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 PTPN22Q9Y2R2 807 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 JRKLQ9Y4A0 524 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 PCDHGC5Q9Y5F6 944 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 SMIM28A0A1B0GU29 152 aa19.3■□□□□ 0.68
COMMD4-208ENST00000563220 ANO9A1A5B4 782 aa19.3■□□□□ 0.68
COMMD4-208ENST00000563220 CFHP08603 1231 aa19.3■□□□□ 0.68
COMMD4-208ENST00000563220 GNA15P30679 374 aa19.3■□□□□ 0.68
COMMD4-208ENST00000563220 NOP2P46087 812 aaKnown RBP19.3■□□□□ 0.68
COMMD4-208ENST00000563220 RAP1GAPP47736 663 aa19.3■□□□□ 0.68
COMMD4-208ENST00000563220 ZNF677Q86XU0 584 aa19.3■□□□□ 0.68
COMMD4-208ENST00000563220 STARD7Q9NQZ5 370 aa19.3■□□□□ 0.68
COMMD4-208ENST00000563220 GRID2IPA4D2P6 1211 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 PPEF2O14830 753 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 GPR182O15218 404 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 MYCP01106 439 aaPredicted RBP19.29■□□□□ 0.68
COMMD4-208ENST00000563220 GHRP10912 638 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 CD52P31358 61 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 CLEC16AQ2KHT3 1053 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 ZNF394Q53GI3 561 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 ZNF618Q5T7W0 954 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 SLC35G2Q8TBE7 412 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 CTNNBL1Q8WYA6 563 aaPredicted RBP19.29■□□□□ 0.68
COMMD4-208ENST00000563220 ANKRD7Q92527 254 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 TSC1Q92574 1164 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 FAXDC2Q96IV6 333 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 CARD6Q9BX69 1037 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 SMYD3Q9H7B4 428 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 ERVK-5Q9HDB9 667 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 OSGEPQ9NPF4 335 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 CHST12Q9NRB3 414 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 PADI3Q9ULW8 664 aa19.29■□□□□ 0.68
COMMD4-208ENST00000563220 STAU1O95793 577 aaKnown RBP19.28■□□□□ 0.68
COMMD4-208ENST00000563220 UNGP13051 313 aaPredicted RBP19.28■□□□□ 0.68
COMMD4-208ENST00000563220 LPIN1Q14693 890 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 FAM26DQ5JW98 314 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 ACAD10Q6JQN1 1059 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 BEST2Q8NFU1 509 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 TPCN2Q8NHX9 752 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 PHF24Q9UPV7 400 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 NCANO14594 1321 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 MEIS3P2A8K0S8 358 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 SRGAP2O75044 1071 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 CYP1A1P04798 512 aaPredicted RBP19.28■□□□□ 0.68
COMMD4-208ENST00000563220 KCNE1P15382 129 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 SSTR3P32745 418 aaPredicted RBP19.28■□□□□ 0.68
COMMD4-208ENST00000563220 MTFR1Q15390 333 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 ZNF606Q8WXB4 792 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 RFFLQ8WZ73 363 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 CYFIP2Q96F07 1278 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 ZSWIM1Q9BR11 485 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 FAM105AQ9NUU6 356 aa19.28■□□□□ 0.68
COMMD4-208ENST00000563220 A0A0U1RQG5 324 aaPredicted RBP19.27■□□□□ 0.68
COMMD4-208ENST00000563220 THAP12O43422 761 aa19.27■□□□□ 0.68
COMMD4-208ENST00000563220 NCK2O43639 380 aa19.27■□□□□ 0.68
COMMD4-208ENST00000563220 GPC5P78333 572 aa19.27■□□□□ 0.68
COMMD4-208ENST00000563220 TUBB2AQ13885 445 aa19.27■□□□□ 0.68
COMMD4-208ENST00000563220 LRRC57Q8N9N7 239 aa19.27■□□□□ 0.68
COMMD4-208ENST00000563220 WHAMMQ8TF30 809 aa19.27■□□□□ 0.68
COMMD4-208ENST00000563220 TUBB2BQ9BVA1 445 aa19.27■□□□□ 0.68
COMMD4-208ENST00000563220 TLR10Q9BXR5 811 aa19.27■□□□□ 0.68
COMMD4-208ENST00000563220 WBP1LQ9NX94 342 aa19.27■□□□□ 0.68
COMMD4-208ENST00000563220 PUF60Q9UHX1 559 aaKnown RBP19.27■□□□□ 0.68
COMMD4-208ENST00000563220 UBQLN1Q9UMX0 589 aaKnown RBP19.27■□□□□ 0.68
COMMD4-208ENST00000563220 SAR1BQ9Y6B6 198 aa19.27■□□□□ 0.68
COMMD4-208ENST00000563220 CITO14578 2027 aa19.27■□□□□ 0.67
COMMD4-208ENST00000563220 ARVCFO00192 962 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 MGEA5O60502 916 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 FTCDO95954 541 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 YWHAEP62258 255 aaKnown RBP19.26■□□□□ 0.67
COMMD4-208ENST00000563220 NAA30Q147X3 362 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-208ENST00000563220 TRAF7Q6Q0C0 670 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 CPA5Q8WXQ8 436 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 GOLPH3Q9H4A6 298 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 PAK6Q9NQU5 681 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-208ENST00000563220 CHORDC1Q9UHD1 332 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-208ENST00000563220 COG5Q9UP83 839 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 KBTBD13C9JR72 458 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 CKBP12277 381 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 SOX4Q06945 474 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-208ENST00000563220 IFI16Q16666 785 aaKnown RBP19.26■□□□□ 0.67
COMMD4-208ENST00000563220 C9orf57Q5W0N0 161 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 PASD1Q8IV76 773 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 TFAP2BQ92481 460 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 TWNKQ96RR1 684 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 CYP3A43Q9HB55 503 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 SNX12Q9UMY4 172 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 CEP350Q5VT06 3117 aa19.26■□□□□ 0.67
COMMD4-208ENST00000563220 PTGESO14684 152 aa19.25■□□□□ 0.67
COMMD4-208ENST00000563220 P4HA1P13674 534 aa19.25■□□□□ 0.67
COMMD4-208ENST00000563220 ZSCAN20P17040 1043 aaPredicted RBP19.25■□□□□ 0.67
COMMD4-208ENST00000563220 BRD2P25440 801 aaKnown RBP19.25■□□□□ 0.67
COMMD4-208ENST00000563220 PAK2Q13177 524 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms