RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 CCDC47Q96A33 483 aaKnown RBP20.2■□□□□ 0.82
CDH11-206ENST00000562998 MFSD14AQ96MC6 490 aa20.2■□□□□ 0.82
CDH11-206ENST00000562998 GSDMAQ96QA5 445 aa20.2■□□□□ 0.82
CDH11-206ENST00000562998 TRAF3IP3Q9Y228 551 aa20.2■□□□□ 0.82
CDH11-206ENST00000562998 CDY1Q9Y6F8 540 aa20.2■□□□□ 0.82
CDH11-206ENST00000562998 TSC2P49815 1807 aa20.2■□□□□ 0.82
CDH11-206ENST00000562998 ABLIM3O94929 683 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 CYP11A1P05108 521 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 SPATA31D3P0C874 917 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 TYMPP19971 482 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 CYP2J2P51589 502 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 TFAMQ00059 246 aaKnown RBP20.19■□□□□ 0.82
CDH11-206ENST00000562998 CYP24A1Q07973 514 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 MYBPC2Q14324 1141 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 PSMD6Q15008 389 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 NFIL3Q16649 462 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 COBLL1Q53SF7 1204 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 CYP26C1Q6V0L0 522 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 SPATA31D4Q6ZUB0 917 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 KREMEN2Q8NCW0 462 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 CACTINQ8WUQ7 758 aaKnown RBP20.19■□□□□ 0.82
CDH11-206ENST00000562998 ZNF707Q96C28 371 aaPredicted RBP20.19■□□□□ 0.82
CDH11-206ENST00000562998 FAM84AQ96KN4 292 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 SENP8Q96LD8 212 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 PHF7Q9BWX1 381 aaPredicted RBP20.19■□□□□ 0.82
CDH11-206ENST00000562998 INTS13Q9NVM9 706 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 SIX4Q9UIU6 781 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 FBXL5Q9UKA1 691 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 PCDHA5Q9Y5H7 936 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 DENND4AQ7Z401 1863 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 C2orf16Q68DN1 1984 aa20.19■□□□□ 0.82
CDH11-206ENST00000562998 LOC730098B7Z3J9 87 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 H7C4K7 107 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 TNFRSF10AO00220 468 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 ZCWPW2Q504Y3 356 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 CES5AQ6NT32 575 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 TMC5Q6UXY8 1006 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 WDR49Q8IV35 697 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 RDH13Q8NBN7 331 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 OR5B17Q8NGF7 314 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 ZNF461Q8TAF7 563 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 NECTIN4Q96NY8 510 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 MTMR12Q9C0I1 747 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 POMKQ9H5K3 350 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 ZDHHC7Q9NXF8 308 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 ITGA11Q9UKX5 1188 aa20.18■□□□□ 0.82
CDH11-206ENST00000562998 RFPL2O75678 378 aa20.17■□□□□ 0.82
CDH11-206ENST00000562998 ZMYND10O75800 440 aa20.17■□□□□ 0.82
CDH11-206ENST00000562998 KIF20AO95235 890 aa20.17■□□□□ 0.82
CDH11-206ENST00000562998 ITGB3P05106 788 aa20.17■□□□□ 0.82
CDH11-206ENST00000562998 MTHFRP42898 656 aa20.17■□□□□ 0.82
CDH11-206ENST00000562998 TAF6P49848 677 aa20.17■□□□□ 0.82
CDH11-206ENST00000562998 CLDN10P78369 228 aa20.17■□□□□ 0.82
CDH11-206ENST00000562998 ROR1Q01973 937 aa20.17■□□□□ 0.82
CDH11-206ENST00000562998 ELMSAN1Q6PJG2 1045 aa20.17■□□□□ 0.82
CDH11-206ENST00000562998 RTL10Q7L3V2 364 aa20.17■□□□□ 0.82
CDH11-206ENST00000562998 GJD3Q8N144 294 aa20.17■□□□□ 0.82
CDH11-206ENST00000562998 LRRC52Q8N7C0 313 aa20.17■□□□□ 0.82
CDH11-206ENST00000562998 PLEKHO2Q8TD55 490 aa20.17■□□□□ 0.82
CDH11-206ENST00000562998 NOC3LQ8WTT2 800 aaKnown RBP20.17■□□□□ 0.82
CDH11-206ENST00000562998 RIPOR3Q96MK2 946 aa20.17■□□□□ 0.82
CDH11-206ENST00000562998 OXCT2Q9BYC2 517 aaPredicted RBP20.17■□□□□ 0.82
CDH11-206ENST00000562998 TIMM13Q9Y5L4 95 aaPredicted RBP20.17■□□□□ 0.82
CDH11-206ENST00000562998 CCDC195A0A1B0GUA6 201 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 WDR27A2RRH5 827 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 EXOC3O60645 756 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 NR3C1P04150 777 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 WEE2P0C1S8 567 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 POLR2BP30876 1174 aaKnown RBP20.16■□□□□ 0.82
CDH11-206ENST00000562998 HOXA9P31269 272 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 PNPLA4P41247 253 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 MCCD1P59942 119 aaPredicted RBP20.16■□□□□ 0.82
CDH11-206ENST00000562998 UBE2HP62256 183 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 YWHAHQ04917 246 aaPredicted RBP20.16■□□□□ 0.82
CDH11-206ENST00000562998 DUOXA2Q1HG44 320 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 UVSSAQ2YD98 709 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 CTXN3Q4LDR2 81 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 ATAT1Q5SQI0 421 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 LMBRD2Q68DH5 695 aaPredicted RBP20.16■□□□□ 0.82
CDH11-206ENST00000562998 ZNF280DQ6N043 979 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 DSTYKQ6XUX3 929 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 ERCC4Q92889 916 aaPredicted RBP20.16■□□□□ 0.82
CDH11-206ENST00000562998 POP1Q99575 1024 aaKnown RBP20.16■□□□□ 0.82
CDH11-206ENST00000562998 CGRRF1Q99675 332 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 RMND1Q9NWS8 449 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 AGAP1Q9UPQ3 857 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 MAPK8IP1Q9UQF2 711 aa20.16■□□□□ 0.82
CDH11-206ENST00000562998 KPNA7A9QM74 516 aa20.15■□□□□ 0.82
CDH11-206ENST00000562998 POU2F2P09086 479 aa20.15■□□□□ 0.82
CDH11-206ENST00000562998 ODC1P11926 461 aa20.15■□□□□ 0.82
CDH11-206ENST00000562998 ATF2P15336 505 aa20.15■□□□□ 0.82
CDH11-206ENST00000562998 CASP4P49662 377 aa20.15■□□□□ 0.82
CDH11-206ENST00000562998 ZNF658Q5TYW1 1059 aaPredicted RBP20.15■□□□□ 0.82
CDH11-206ENST00000562998 TPGS2Q68CL5 300 aa20.15■□□□□ 0.82
CDH11-206ENST00000562998 SMYD4Q8IYR2 804 aaPredicted RBP20.15■□□□□ 0.82
CDH11-206ENST00000562998 CSGALNACT2Q8N6G5 542 aa20.15■□□□□ 0.82
CDH11-206ENST00000562998 PARD3BQ8TEW8 1205 aa20.15■□□□□ 0.82
CDH11-206ENST00000562998 ZNF516Q92618 1163 aa20.15■□□□□ 0.82
CDH11-206ENST00000562998 PRKD2Q9BZL6 878 aa20.15■□□□□ 0.82
CDH11-206ENST00000562998 GDAP2Q9NXN4 497 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms