RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 LINC00518Q8N0U6 118 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.9□□□□□ -0.83
CDH1-205ENST00000562836 TTLL11Q8NHH1 800 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 ZNF274Q96GC6 653 aaPredicted RBP9.9□□□□□ -0.83
CDH1-205ENST00000562836 DDX23Q9BUQ8 820 aaKnown RBP9.9□□□□□ -0.83
CDH1-205ENST00000562836 RNPEPL1Q9HAU8 725 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 S100A14Q9HCY8 104 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 ARHGAP26Q9UNA1 814 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 IFT52Q9Y366 437 aa9.9□□□□□ -0.83
CDH1-205ENST00000562836 YTHDC2Q9H6S0 1430 aaKnown RBP9.9□□□□□ -0.83
CDH1-205ENST00000562836 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.89□□□□□ -0.83
CDH1-205ENST00000562836 GOLGA8OA6NCC3 632 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 CENPBD1B2RD01 187 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 GOLGA8NF8WBI6 632 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 COBLO75128 1261 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 SIN3BO75182 1162 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 LRRN2O75325 713 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 KRT6AP02538 564 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 KRT6BP04259 564 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 LYNP07948 512 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 CHRM5P08912 532 aaPredicted RBP9.89□□□□□ -0.83
CDH1-205ENST00000562836 ESRRAP11474 423 aaPredicted RBP9.89□□□□□ -0.83
CDH1-205ENST00000562836 MYL4P12829 197 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 P4HA1P13674 534 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 GPATCH4Q5T3I0 446 aaKnown RBP9.89□□□□□ -0.83
CDH1-205ENST00000562836 MAP3K21Q5TCX8 1036 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 C11orf57Q6ZUT1 292 aaPredicted RBP9.89□□□□□ -0.83
CDH1-205ENST00000562836 HEATR4Q86WZ0 1026 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.89□□□□□ -0.83
CDH1-205ENST00000562836 SYCE1Q8N0S2 351 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 CPA6Q8N4T0 437 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.89□□□□□ -0.83
CDH1-205ENST00000562836 AGR3Q8TD06 166 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 EME1Q96AY2 570 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 REXO5Q96IC2 774 aaKnown RBP9.89□□□□□ -0.83
CDH1-205ENST00000562836 ZNF333Q96JL9 665 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 CCDC138Q96M89 665 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 PHF20Q9BVI0 1012 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 CCDC113Q9H0I3 377 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 SAMD15Q9P1V8 674 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 STARD13Q9Y3M8 1113 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 SBNO1A3KN83 1393 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 FAM170AA1A519 330 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 FAM221BA6H8Z2 402 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 APAF1O14727 1248 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 ATMINO43313 823 aaPredicted RBP9.89□□□□□ -0.83
CDH1-205ENST00000562836 PI15O43692 258 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 BRINP1O60477 761 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 GTF2H1P32780 548 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 KRT2P35908 639 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 RGS2P41220 211 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 PPM1FP49593 454 aaPredicted RBP9.89□□□□□ -0.83
CDH1-205ENST00000562836 CDK7P50613 346 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 FANCCQ00597 558 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 MDH1BQ5I0G3 518 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 TRAF7Q6Q0C0 670 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 KDELC1Q6UW63 502 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 IDO2Q6ZQW0 420 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 RFX8Q6ZV50 586 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 ASAP3Q8TDY4 903 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 TMIGD2Q96BF3 282 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 EYA1Q99502 592 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 SH2D4AQ9H788 454 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 ZDHHC4Q9NPG8 344 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 DACT1Q9NYF0 836 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 TAS2R7Q9NYW3 318 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 CLEC4AQ9UMR7 237 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 HPS5Q9UPZ3 1129 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 CDC42BPBQ9Y5S2 1711 aa9.89□□□□□ -0.83
CDH1-205ENST00000562836 FADS2P1A8MWK0 482 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 GOLGA8SH3BPF8 625 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 PIK3CDO00329 1044 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 KRT18P05783 430 aaKnown RBP9.88□□□□□ -0.83
CDH1-205ENST00000562836 TPBGLP0DKB5 382 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 CXCR2P25025 360 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 PPARGP37231 505 aaPredicted RBP9.88□□□□□ -0.83
CDH1-205ENST00000562836 ETV1P50549 477 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 KYAT1Q16773 422 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 KRT24Q2M2I5 525 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 LEXMQ3ZCV2 418 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 STXBP5Q5T5C0 1151 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 OR7E24Q6IFN5 339 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 CEP85Q6P2H3 762 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 CROCCP3Q8IVE0 287 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 CDH26Q8IXH8 852 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 ANKS4BQ8N8V4 417 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 TEX47Q8TBZ9 253 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 FNIP1Q8TF40 1166 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 POMGNT1Q8WZA1 660 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 FERMT2Q96AC1 680 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 MNTQ99583 582 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 SEC22CQ9BRL7 303 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 FAM126AQ9BYI3 521 aaPredicted RBP9.88□□□□□ -0.83
CDH1-205ENST00000562836 ACAD9Q9H845 621 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 NGRNQ9NPE2 291 aaKnown RBP9.88□□□□□ -0.83
CDH1-205ENST00000562836 AMACRQ9UHK6 382 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 BAG5Q9UL15 447 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 ZMIZ1Q9ULJ6 1067 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 C15orf38-AP3S2A0A0A6YYH1 394 aa9.88□□□□□ -0.83
CDH1-205ENST00000562836 CCDC78A2IDD5 438 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms