RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ATRIPQ8WXE1 791 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 TRPV6Q9H1D0 765 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 KCNF1Q9H3M0 494 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 RABEP2Q9H5N1 569 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 PLEKHA5Q9HAU0 1116 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 KCNK9Q9NPC2 374 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 AAASQ9NRG9 546 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 SETD4Q9NVD3 440 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 UTP6Q9NYH9 597 aaKnown RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 BUB1BO60566 1050 aaPredicted RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 ATP9AO75110 1047 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 LUC7L3O95232 432 aaKnown RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 STAMBPO95630 424 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 GNRH1P01148 92 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 ZNF286BP0CG31 522 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 NFKBIAP25963 317 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 ARPP19P56211 112 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 PLCB4Q15147 1175 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 KIZQ2M2Z5 673 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 LRRC55Q6ZSA7 311 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 ARL10Q8N8L6 244 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 TRAIPQ9BWF2 469 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 NAGPAQ9UK23 515 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 ZBTB24O43167 697 aaPredicted RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 TADA2AO75478 443 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 ZNF131P52739 623 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 EFHC1Q5JVL4 640 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 DARS2Q6PI48 645 aaKnown RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 ARHGEF18Q6ZSZ5 1173 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 SPATA24Q86W54 205 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 SPATA2LQ8IUW3 424 aaPredicted RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 SCN4BQ8IWT1 228 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 PPP2R3CQ969Q6 453 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 BTBD7Q9P203 1132 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 RIPK3Q9Y572 518 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 MYH7P12883 1935 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 TIAM2Q8IVF5 1701 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 GOLGA8CPA6NN73 597 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 APOEP02649 317 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 ITGB3P05106 788 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 GLRA2P23416 452 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 TMEM62Q0P6H9 643 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 RCOR2Q8IZ40 523 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 MPP4Q96JB8 637 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 DDX50Q9BQ39 737 aaKnown RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 EPB41L5Q9HCM4 733 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 ANAPC5Q9UJX4 755 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 SMIM23A6NLE4 172 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 F8VZ95 297 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 OAS2P29728 719 aaKnown RBP7.97□□□□□ -1.13
TCF4-216ENST00000562680 ACAD10Q6JQN1 1059 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 CDKL3Q8IVW4 592 aaPredicted RBP7.97□□□□□ -1.13
TCF4-216ENST00000562680 ZNF831Q5JPB2 1677 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 SYNJ2BP-COX16A0A087WUM0 186 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 TARSL2A2RTX5 802 aaKnown RBP7.97□□□□□ -1.13
TCF4-216ENST00000562680 CA12O43570 354 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 MYCP01106 439 aaPredicted RBP7.97□□□□□ -1.13
TCF4-216ENST00000562680 VTNP04004 478 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 CPB1P15086 417 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 KRT15P19012 456 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 SERPINB6P35237 376 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 PTENP60484 403 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 PTPROQ16827 1216 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 ALS2CLQ60I27 953 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 ARHGAP18Q8N392 663 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 USP38Q8NB14 1042 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 FAM71BQ8TC56 605 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 GPR20Q99678 358 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 COX16Q9P0S2 106 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 FRMD3A2A2Y4 597 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 CFAP69A5D8W1 941 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 ADORA2BP29275 332 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 GNL1P36915 607 aaPredicted RBP7.97□□□□□ -1.13
TCF4-216ENST00000562680 GARSP41250 739 aaKnown RBP7.97□□□□□ -1.13
TCF4-216ENST00000562680 LHX1P48742 406 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 PMS1P54277 932 aaKnown RBP7.97□□□□□ -1.13
TCF4-216ENST00000562680 TBX2Q13207 712 aaPredicted RBP7.97□□□□□ -1.13
TCF4-216ENST00000562680 MTF1Q14872 753 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 CPLX4Q7Z7G2 160 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 SIAH1Q8IUQ4 282 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 PDIK1LQ8N165 341 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 AFAP1L2Q8N4X5 818 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 VCPIP1Q96JH7 1222 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 CFAP57Q96MR6 1250 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 KLC2Q9H0B6 622 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 TMEM117Q9H0C3 514 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 VCXQ9H320 206 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 ZBBXA8MT70 800 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 H7C4K7 107 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 TFRCP02786 760 aaKnown RBP7.97□□□□□ -1.13
TCF4-216ENST00000562680 THP07101 528 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 VPS41P49754 854 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 SLC12A2P55011 1212 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 POU5F1Q01860 360 aaKnown RBP7.97□□□□□ -1.13
TCF4-216ENST00000562680 TMED1Q13445 227 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 UAP1Q16222 522 aaPredicted RBP7.97□□□□□ -1.13
TCF4-216ENST00000562680 BTBD8Q5XKL5 378 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 ADAT2Q7Z6V5 191 aaKnown RBP7.97□□□□□ -1.13
TCF4-216ENST00000562680 SRLQ86TD4 932 aa7.97□□□□□ -1.13
TCF4-216ENST00000562680 TAS1R2Q8TE23 839 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms