RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CNPP09543 421 aaKnown RBP14.48□□□□□ -0.09
CDH1-204ENST00000562118 TMEM191BP0C7N4 346 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 TKTP29401 623 aaKnown RBP14.48□□□□□ -0.09
CDH1-204ENST00000562118 POLR2BP30876 1174 aaKnown RBP14.48□□□□□ -0.09
CDH1-204ENST00000562118 GTF2H1P32780 548 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 LTBRP36941 435 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 TAF6P49848 677 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 VAMP7P51809 220 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 RBP5P82980 135 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 CREMQ03060 361 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 ADAM15Q13444 863 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 FAM171A1Q5VUB5 890 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 CEP135Q66GS9 1140 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 LMBRD2Q68DH5 695 aaPredicted RBP14.48□□□□□ -0.09
CDH1-204ENST00000562118 SLC8B1Q6J4K2 584 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 FRMD5Q7Z6J6 570 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 VN1R2Q8NFZ6 395 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 SLC22A17Q8WUG5 538 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 PPP2R3CQ969Q6 453 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 CCDC127Q96BQ5 260 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 PABPC5Q96DU9 382 aaKnown RBP14.48□□□□□ -0.09
CDH1-204ENST00000562118 KLHL5Q96PQ7 755 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 FNBP1Q96RU3 617 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 FUCA2Q9BTY2 467 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 C5orf42Q9H799 3197 aa14.48□□□□□ -0.09
CDH1-204ENST00000562118 PTPRDP23468 1912 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.47□□□□□ -0.09
CDH1-204ENST00000562118 TEX28O15482 410 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 VNN1O95497 513 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 TNNC2P02585 160 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 DLATP10515 647 aaKnown RBP14.47□□□□□ -0.09
CDH1-204ENST00000562118 EPB41P11171 864 aaKnown RBP14.47□□□□□ -0.09
CDH1-204ENST00000562118 GTF2F1P35269 517 aaKnown RBP eCLIP14.47□□□□□ -0.09
CDH1-204ENST00000562118 CLCN4P51793 760 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 PPP3CAQ08209 521 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 BMS1Q14692 1282 aaKnown RBP14.47□□□□□ -0.09
CDH1-204ENST00000562118 SV2CQ496J9 727 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 LILRA6Q6PI73 481 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 ANKS3Q6ZW76 656 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 USP37Q86T82 979 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 IRF2BP1Q8IU81 584 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 AUTS2Q8WXX7 1259 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 SLC35C1Q96A29 364 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 MSLNLQ96KJ4 702 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 B3GALT6Q96L58 329 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 SENP8Q96LD8 212 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 CLSTN3Q9BQT9 956 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 OXCT2Q9BYC2 517 aaPredicted RBP14.47□□□□□ -0.09
CDH1-204ENST00000562118 METTL14Q9HCE5 456 aaKnown RBP14.47□□□□□ -0.09
CDH1-204ENST00000562118 AGAP1Q9UPQ3 857 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 COQ4Q9Y3A0 265 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 VCANP13611 3396 aa14.47□□□□□ -0.09
CDH1-204ENST00000562118 KPNA7A9QM74 516 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 I3L4J1 428 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 CST3P01034 146 aaPredicted RBP14.46□□□□□ -0.09
CDH1-204ENST00000562118 FAM163BP0C2L3 166 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 TNNI1P19237 187 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 ATICP31939 592 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 NDUFV1P49821 464 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 PSMD5Q16401 504 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 VARS2Q5ST30 1063 aaKnown RBP14.46□□□□□ -0.09
CDH1-204ENST00000562118 KLHL10Q6JEL2 608 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 RSPO2Q6UXX9 243 aaPredicted RBP14.46□□□□□ -0.09
CDH1-204ENST00000562118 SV2AQ7L0J3 742 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 DPH6Q7L8W6 267 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 PPFIBP1Q86W92 1011 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 TRIM59Q8IWR1 403 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 CSGALNACT2Q8N6G5 542 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 APPL2Q8NEU8 664 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 HDAC7Q8WUI4 952 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 RIN2Q8WYP3 895 aaPredicted RBP14.46□□□□□ -0.09
CDH1-204ENST00000562118 EEF2KMTQ96G04 330 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 RTP3Q9BQQ7 232 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 TMEM8AQ9HCN3 771 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 DACH1Q9UI36 760 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 COG5Q9UP83 839 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 NUB1Q9Y5A7 615 aa14.46□□□□□ -0.09
CDH1-204ENST00000562118 C2orf16Q68DN1 1984 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 ARHGEF37A1IGU5 675 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 GABRDO14764 452 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 TBX10O75333 385 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 GNA14O95837 355 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 TRIM49P0CI25 452 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 TRIM49CP0CI26 452 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 ODC1P11926 461 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 KRT13P13646 458 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 NRIP1P48552 1158 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 RAB33AQ14088 237 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 PRSS55Q6UWB4 352 aaPredicted RBP14.45□□□□□ -0.1
CDH1-204ENST00000562118 TOP6BLQ8N6T0 577 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 NOC3LQ8WTT2 800 aaKnown RBP14.45□□□□□ -0.1
CDH1-204ENST00000562118 TAF4BQ92750 862 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 FAXDC2Q96IV6 333 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 EMILIN2Q9BXX0 1053 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 RHOBTB2Q9BYZ6 727 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 TLE6Q9H808 572 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 CLEC1BQ9P126 229 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 ARMCX3Q9UH62 379 aaPredicted RBP14.45□□□□□ -0.1
CDH1-204ENST00000562118 DSEQ9UL01 958 aa14.45□□□□□ -0.1
CDH1-204ENST00000562118 HCFC2Q9Y5Z7 792 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms