RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 C9orf57Q5W0N0 161 aa27.57■■■□□ 2
MSLN-203ENST00000561896 STXBP4Q6ZWJ1 553 aa27.57■■■□□ 2
MSLN-203ENST00000561896 SLC44A3Q8N4M1 653 aa27.57■■■□□ 2
MSLN-203ENST00000561896 FOXD4L4Q8WXT5 416 aaPredicted RBP27.57■■■□□ 2
MSLN-203ENST00000561896 TRIM9Q9C026 710 aa27.57■■■□□ 2
MSLN-203ENST00000561896 DNMT3BQ9UBC3 853 aaKnown RBP27.57■■■□□ 2
MSLN-203ENST00000561896 OR6C75A6NL08 312 aa27.56■■■□□ 2
MSLN-203ENST00000561896 LRG1P02750 347 aa27.56■■■□□ 2
MSLN-203ENST00000561896 GUCY2FP51841 1108 aa27.56■■■□□ 2
MSLN-203ENST00000561896 NTHL1P78549 312 aa27.56■■■□□ 2
MSLN-203ENST00000561896 HTR4Q13639 388 aa27.56■■■□□ 2
MSLN-203ENST00000561896 PABPC1LQ4VXU2 614 aaKnown RBP27.56■■■□□ 2
MSLN-203ENST00000561896 DSTYKQ6XUX3 929 aa27.56■■■□□ 2
MSLN-203ENST00000561896 USP37Q86T82 979 aa27.56■■■□□ 2
MSLN-203ENST00000561896 FGF13Q92913 245 aa27.56■■■□□ 2
MSLN-203ENST00000561896 CYP4F11Q9HBI6 524 aa27.56■■■□□ 2
MSLN-203ENST00000561896 PDGFBP01127 241 aaPredicted RBP27.55■■■□□ 2
MSLN-203ENST00000561896 ARPP19P56211 112 aa27.55■■■□□ 2
MSLN-203ENST00000561896 SYCP3Q8IZU3 236 aa27.55■■■□□ 2
MSLN-203ENST00000561896 TMEM130Q8N3G9 435 aa27.55■■■□□ 2
MSLN-203ENST00000561896 IKZF4Q9H2S9 585 aa27.55■■■□□ 2
MSLN-203ENST00000561896 WNT16Q9UBV4 365 aa27.55■■■□□ 2
MSLN-203ENST00000561896 INSL5Q9Y5Q6 135 aa27.55■■■□□ 2
MSLN-203ENST00000561896 KIAA0391O15091 583 aaKnown RBP27.54■■■□□ 2
MSLN-203ENST00000561896 SRFP11831 508 aa27.54■■■□□ 2
MSLN-203ENST00000561896 ODC1P11926 461 aa27.54■■■□□ 2
MSLN-203ENST00000561896 PTPN2P17706 415 aa27.54■■■□□ 2
MSLN-203ENST00000561896 PKP1Q13835 747 aa27.54■■■□□ 2
MSLN-203ENST00000561896 MYBPC2Q14324 1141 aa27.54■■■□□ 2
MSLN-203ENST00000561896 MTSS1LQ765P7 747 aa27.54■■■□□ 2
MSLN-203ENST00000561896 RSAD2Q8WXG1 361 aa27.54■■■□□ 2
MSLN-203ENST00000561896 DHX58Q96C10 678 aa27.54■■■□□ 2
MSLN-203ENST00000561896 SENP8Q96LD8 212 aa27.54■■■□□ 2
MSLN-203ENST00000561896 PYM1Q9BRP8 204 aaKnown RBP27.54■■■□□ 2
MSLN-203ENST00000561896 PCDHA7Q9UN72 937 aa27.54■■■□□ 2
MSLN-203ENST00000561896 PPEF2O14830 753 aa27.53■■■□□ 2
MSLN-203ENST00000561896 SEC24AO95486 1093 aa27.53■■■□□ 2
MSLN-203ENST00000561896 ME1P48163 572 aa27.53■■■□□ 2
MSLN-203ENST00000561896 CLCN5P51795 746 aa27.53■■■□□ 2
MSLN-203ENST00000561896 VCPP55072 806 aaKnown RBP27.53■■■□□ 2
MSLN-203ENST00000561896 IER5LQ5T953 404 aa27.53■■■□□ 2
MSLN-203ENST00000561896 OVOS1Q6IE37 1185 aa27.53■■■□□ 2
MSLN-203ENST00000561896 BRSK2Q8IWQ3 736 aa27.53■■■□□ 2
MSLN-203ENST00000561896 C7orf25Q9BPX7 421 aa27.53■■■□□ 2
MSLN-203ENST00000561896 FGFBP2Q9BYJ0 223 aa27.53■■■□□ 2
MSLN-203ENST00000561896 HCFC1R1Q9NWW0 138 aa27.53■■■□□ 2
MSLN-203ENST00000561896 DPP3Q9NY33 737 aa27.53■■■□□ 2
MSLN-203ENST00000561896 FAM13BQ9NYF5 915 aa27.53■■■□□ 2
MSLN-203ENST00000561896 RCOR1Q9UKL0 485 aa27.53■■■□□ 2
MSLN-203ENST00000561896 DSEQ9UL01 958 aa27.53■■■□□ 2
MSLN-203ENST00000561896 TCHHQ07283 1943 aa27.52■■■□□ 2
MSLN-203ENST00000561896 MICAL2O94851 1124 aa27.52■■■□□ 2
MSLN-203ENST00000561896 CYP11A1P05108 521 aa27.52■■■□□ 2
MSLN-203ENST00000561896 RHOP08100 348 aa27.52■■■□□ 2
MSLN-203ENST00000561896 CPB1P15086 417 aa27.52■■■□□ 2
MSLN-203ENST00000561896 ADCY1Q08828 1119 aa27.52■■■□□ 2
MSLN-203ENST00000561896 GPR17Q13304 367 aa27.52■■■□□ 2
MSLN-203ENST00000561896 RESP18Q5W5W9 173 aa27.52■■■□□ 2
MSLN-203ENST00000561896 ITFG1Q8TB96 612 aa27.52■■■□□ 2
MSLN-203ENST00000561896 FAM213AQ9BRX8 229 aa27.52■■■□□ 2
MSLN-203ENST00000561896 MFSD1Q9H3U5 465 aa27.52■■■□□ 2
MSLN-203ENST00000561896 GDE1Q9NZC3 331 aa27.52■■■□□ 2
MSLN-203ENST00000561896 FBXL21Q9UKT6 434 aa27.52■■■□□ 2
MSLN-203ENST00000561896 MRPS23Q9Y3D9 190 aaKnown RBP27.52■■■□□ 2
MSLN-203ENST00000561896 TIMM13Q9Y5L4 95 aaPredicted RBP27.52■■■□□ 2
MSLN-203ENST00000561896 NUMBLQ9Y6R0 609 aa27.52■■■□□ 2
MSLN-203ENST00000561896 TSC2P49815 1807 aa27.52■■■□□ 2
MSLN-203ENST00000561896 SPTLC1O15269 473 aa27.51■■□□□ 1.99
MSLN-203ENST00000561896 EIF3DO15371 548 aaKnown RBP eCLIP27.51■■□□□ 1.99
MSLN-203ENST00000561896 EXTL3O43909 919 aa27.51■■□□□ 1.99
MSLN-203ENST00000561896 PRPF6O94906 941 aaKnown RBP27.51■■□□□ 1.99
MSLN-203ENST00000561896 PTPN5P54829 565 aa27.51■■□□□ 1.99
MSLN-203ENST00000561896 FOXD4L6Q3SYB3 417 aaPredicted RBP27.51■■□□□ 1.99
MSLN-203ENST00000561896 ASTLQ6HA08 431 aaPredicted RBP27.51■■□□□ 1.99
MSLN-203ENST00000561896 FOXD4L3Q6VB84 417 aaPredicted RBP27.51■■□□□ 1.99
MSLN-203ENST00000561896 NPAS3Q8IXF0 933 aa27.51■■□□□ 1.99
MSLN-203ENST00000561896 EFCAB13Q8IY85 973 aa27.51■■□□□ 1.99
MSLN-203ENST00000561896 SLC2A4RGQ9NR83 387 aa27.51■■□□□ 1.99
MSLN-203ENST00000561896 ZNF197O14709 1029 aa27.5■■□□□ 1.99
MSLN-203ENST00000561896 POLR2DO15514 142 aaKnown RBP27.5■■□□□ 1.99
MSLN-203ENST00000561896 NARSO43776 548 aaKnown RBP27.5■■□□□ 1.99
MSLN-203ENST00000561896 TAF6P49848 677 aa27.5■■□□□ 1.99
MSLN-203ENST00000561896 ASIC1P78348 528 aa27.5■■□□□ 1.99
MSLN-203ENST00000561896 NHLH1Q02575 133 aa27.5■■□□□ 1.99
MSLN-203ENST00000561896 DNM1Q05193 864 aaKnown RBP27.5■■□□□ 1.99
MSLN-203ENST00000561896 RNF19BQ6ZMZ0 732 aa27.5■■□□□ 1.99
MSLN-203ENST00000561896 ELMOD1Q8N336 334 aa27.5■■□□□ 1.99
MSLN-203ENST00000561896 LEMD2Q8NC56 503 aa27.5■■□□□ 1.99
MSLN-203ENST00000561896 PRSS33Q8NF86 280 aa27.5■■□□□ 1.99
MSLN-203ENST00000561896 RBAKQ9NYW8 714 aaPredicted RBP27.5■■□□□ 1.99
MSLN-203ENST00000561896 HSFX1Q9UBD0 423 aa27.5■■□□□ 1.99
MSLN-203ENST00000561896 HOXD11P31277 338 aaPredicted RBP27.49■■□□□ 1.99
MSLN-203ENST00000561896 PNPLA4P41247 253 aa27.49■■□□□ 1.99
MSLN-203ENST00000561896 PLD1Q13393 1074 aa27.49■■□□□ 1.99
MSLN-203ENST00000561896 IQCEQ6IPM2 695 aa27.49■■□□□ 1.99
MSLN-203ENST00000561896 UNC13DQ70J99 1090 aa27.49■■□□□ 1.99
MSLN-203ENST00000561896 EPM2AIP1Q7L775 607 aaPredicted RBP27.49■■□□□ 1.99
MSLN-203ENST00000561896 SPRYD3Q8NCJ5 442 aa27.49■■□□□ 1.99
MSLN-203ENST00000561896 CACTINQ8WUQ7 758 aaKnown RBP27.49■■□□□ 1.99
MSLN-203ENST00000561896 FGF14Q92915 247 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms