RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 EDEM3Q9BZQ6 932 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 NIF3L1Q9GZT8 377 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 CWH43Q9H720 699 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 DNAJB4Q9UDY4 337 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 AJAP1Q9UKB5 411 aaPredicted RBP13.6□□□□□ -0.23
CMTM4-203ENST00000561680 NUB1Q9Y5A7 615 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 H0YGN5 161 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 SPTLC1O15269 473 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 KIF4AO95239 1232 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 TBXAS1P24557 533 aaPredicted RBP13.59□□□□□ -0.23
CMTM4-203ENST00000561680 ASPAP45381 313 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 AARSP49588 968 aaKnown RBP eCLIP13.59□□□□□ -0.23
CMTM4-203ENST00000561680 LILRA4P59901 499 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 POLR2FP61218 127 aaKnown RBP13.59□□□□□ -0.23
CMTM4-203ENST00000561680 SHHQ15465 462 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 IQCEQ6IPM2 695 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 CD300LGQ6UXG3 332 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 ENOSF1Q7L5Y1 443 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 DRC7Q8IY82 874 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 PPM1KQ8N3J5 372 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 RNPC3Q96LT9 517 aaKnown RBP13.59□□□□□ -0.23
CMTM4-203ENST00000561680 KREMEN1Q96MU8 473 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 BCO2Q9BYV7 579 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 GDAP2Q9NXN4 497 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 IMPACTQ9P2X3 320 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 DNAJC12Q9UKB3 198 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 INSL6Q9Y581 213 aa13.59□□□□□ -0.23
CMTM4-203ENST00000561680 COL4A4P53420 1690 aaPredicted RBP13.59□□□□□ -0.23
CMTM4-203ENST00000561680 ZNF638Q14966 1978 aaKnown RBP13.58□□□□□ -0.24
CMTM4-203ENST00000561680 KPNA7A9QM74 516 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 CLSTN1O94985 981 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 P4HA1P13674 534 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 PAX3P23760 479 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 IGFBP6P24592 240 aaPredicted RBP13.58□□□□□ -0.24
CMTM4-203ENST00000561680 OR1G1P47890 313 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 SLC11A1P49279 550 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 BCAR1P56945 870 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 JAM2P57087 298 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 TNNC1P63316 161 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 CUL2Q13617 745 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 BTG3Q14201 252 aaPredicted RBP13.58□□□□□ -0.24
CMTM4-203ENST00000561680 WDR72Q3MJ13 1102 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 DCLRE1AQ6PJP8 1040 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 SCARA5Q6ZMJ2 495 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 RRAGAQ7L523 313 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 LIMS2Q7Z4I7 341 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 PPFIBP1Q86W92 1011 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 SPC24Q8NBT2 197 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 SP7Q8TDD2 431 aaPredicted RBP13.58□□□□□ -0.24
CMTM4-203ENST00000561680 BAP1Q92560 729 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 RABGGTAQ92696 567 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 KAT5Q92993 513 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 ARID3AQ99856 593 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 UBE2OQ9C0C9 1292 aaKnown RBP13.58□□□□□ -0.24
CMTM4-203ENST00000561680 UBE2TQ9NPD8 197 aaPredicted RBP13.58□□□□□ -0.24
CMTM4-203ENST00000561680 NLRC4Q9NPP4 1024 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 NXF1Q9UBU9 619 aaKnown RBP13.58□□□□□ -0.24
CMTM4-203ENST00000561680 CAPN11Q9UMQ6 739 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 POLIQ9UNA4 740 aa13.58□□□□□ -0.24
CMTM4-203ENST00000561680 MRPL42Q9Y6G3 142 aaKnown RBP13.58□□□□□ -0.24
CMTM4-203ENST00000561680 GREB1Q4ZG55 1949 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 CARNS1A5YM72 827 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 F8W810 466 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 RNF225M0QZC1 329 aaPredicted RBP13.57□□□□□ -0.24
CMTM4-203ENST00000561680 NRP1O14786 923 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 MFAP3LO75121 409 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 B3GAT3O94766 335 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 ITGB1P05556 798 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 GALTP07902 379 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 TPM1P09493 284 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 CASP14P31944 242 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 FXR1P51114 621 aaKnown RBP eCLIP13.57□□□□□ -0.24
CMTM4-203ENST00000561680 MFAP3P55082 362 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 ZBED6P86452 979 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 CCDC173Q0VFZ6 552 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 RAPGEF1Q13905 1077 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 SMYD5Q6GMV2 418 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 CACNA2D4Q7Z3S7 1137 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 UBR7Q8N806 425 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 SHC3Q92529 594 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 JAKMIP2Q96AA8 810 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 RAD9AQ99638 391 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 ZBED2Q9BTP6 218 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 STK33Q9BYT3 514 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 GPR88Q9GZN0 384 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 FAM124BQ9H5Z6 455 aaPredicted RBP13.57□□□□□ -0.24
CMTM4-203ENST00000561680 SMYD3Q9H7B4 428 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 CYP3A43Q9HB55 503 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 MARCH5Q9NX47 278 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 MYO6Q9UM54 1294 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 PRG3Q9Y2Y8 225 aaPredicted RBP13.57□□□□□ -0.24
CMTM4-203ENST00000561680 LUC7L2Q9Y383 392 aaKnown RBP13.57□□□□□ -0.24
CMTM4-203ENST00000561680 SNX9Q9Y5X1 595 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 LAMA2P24043 3122 aaKnown RBP13.57□□□□□ -0.24
CMTM4-203ENST00000561680 PLXNA3P51805 1871 aa13.57□□□□□ -0.24
CMTM4-203ENST00000561680 GOLGA6L6A8MZA4 724 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 F8VZ95 297 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 M0QZQ0 153 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 TLL1O43897 1013 aa13.56□□□□□ -0.24
CMTM4-203ENST00000561680 ALDH2P05091 517 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms