RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 DYDC1Q8WWB3 177 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 SLCO2A1Q92959 643 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 C11orf70Q9BRQ4 267 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 ROPN1BQ9BZX4 212 aaPredicted RBP11.65□□□□□ -0.54
NEIL1-202ENST00000561643 ROPN1Q9HAT0 212 aaPredicted RBP11.65□□□□□ -0.54
NEIL1-202ENST00000561643 SAMD15Q9P1V8 674 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 SLC9A2Q9UBY0 812 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 MYPNQ86TC9 1320 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 H0YCG3 227 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 EGFRP00533 1210 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 FDX1P10109 184 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 CHKAP35790 457 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 ADCY8P40145 1251 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 LIN9Q5TKA1 542 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 UPF1Q92900 1129 aaKnown RBP eCLIP11.65□□□□□ -0.54
NEIL1-202ENST00000561643 HERPUD2Q9BSE4 406 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 KIAA1586Q9HCI6 787 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 AAASQ9NRG9 546 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 ARHGAP28Q9P2N2 729 aa11.65□□□□□ -0.54
NEIL1-202ENST00000561643 STBD1O95210 358 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 SSTR3P32745 418 aaPredicted RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 RANBP1P43487 201 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 ITGA8P53708 1063 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 POLGP54098 1239 aaPredicted RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 NLRP11P59045 1033 aaKnown RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 ACTR2P61160 394 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 ARMCX6Q7L4S7 300 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 TAX1BP1Q86VP1 789 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 MGARPQ8TDB4 240 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 P3H4Q92791 437 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 DCLK3Q9C098 648 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 HOMER3Q9NSC5 361 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 USTQ9Y2C2 406 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 PCDHB4Q9Y5E5 795 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 CCT8L1PA6NM43 557 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 POTEJP0CG39 1038 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 RALAP11233 206 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 RTP1P59025 263 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 PTK6Q13882 451 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 GNPTABQ3T906 1256 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 ZACNQ401N2 412 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 TDRD10Q5VZ19 366 aaKnown RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 MFSD5Q6N075 450 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 C15orf39Q6ZRI6 1047 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 SYDE1Q6ZW31 735 aaPredicted RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 EXOC3L1Q86VI1 746 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 JDP2Q8WYK2 163 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 PRCCQ92733 491 aaPredicted RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 ARHGEF2Q92974 986 aaKnown RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 FAM118BQ9BPY3 351 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 PAIP2Q9BPZ3 127 aaKnown RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 NSRP1Q9H0G5 558 aaKnown RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 KDM4CQ9H3R0 1056 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 GINM1Q9NU53 330 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 NOP53Q9NZM5 478 aaKnown RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 ANAPC5Q9UJX4 755 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 AGO2Q9UKV8 859 aaKnown RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 R3HDM2Q9Y2K5 976 aaKnown RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 UTRNP46939 3433 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 ASAP2O43150 1006 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 THAP12O43422 761 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 RGS20O76081 388 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 PROSCO94903 275 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 CENPCQ03188 943 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 PSMD6Q15008 389 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 TMEM270Q6UE05 265 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 ZNF365Q70YC5 407 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 ATL2Q8NHH9 583 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 TMEM143Q96AN5 459 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 DDX27Q96GQ7 796 aaKnown RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 ELAC2Q9BQ52 826 aaKnown RBP11.64□□□□□ -0.55
NEIL1-202ENST00000561643 VPS33BQ9H267 617 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 PDLIM7Q9NR12 457 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 ADAM22Q9P0K1 906 aa11.64□□□□□ -0.55
NEIL1-202ENST00000561643 LRRIQ4A6NIV6 560 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 TP73O15350 636 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 LINGO3P0C6S8 592 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 WNT7BP56706 349 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 BACE1P56817 501 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 ENPEPQ07075 957 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 EMC2Q15006 297 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 LRRC14Q15048 493 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 CNGA2Q16280 664 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 KYNUQ16719 465 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 ZFYVE27Q5T4F4 411 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 RHBDF2Q6PJF5 856 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 CDHR1Q96JP9 859 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 TRAIPQ9BWF2 469 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 ANKFY1Q9P2R3 1169 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 GGT7Q9UJ14 662 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 O00370 1275 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 C4BPAP04003 597 aaKnown RBP11.63□□□□□ -0.55
NEIL1-202ENST00000561643 CYP1A1P04798 512 aaPredicted RBP11.63□□□□□ -0.55
NEIL1-202ENST00000561643 GHRP10912 638 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 KCNA3P22001 575 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 ATP5DP30049 168 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 GNA15P30679 374 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 CUL2Q13617 745 aa11.63□□□□□ -0.55
NEIL1-202ENST00000561643 TBC1D25Q3MII6 688 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms