RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 OR5B17Q8NGF7 314 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 SUSD6Q92537 303 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 SMARCE1Q969G3 411 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 ANKRD36BP1Q96IX9 119 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 IPO9Q96P70 1041 aaKnown RBP21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 TSHZ2Q9NRE2 1034 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 DPP7Q9UHL4 492 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 PCDHA5Q9Y5H7 936 aa21.52■■□□□ 1.04
TSPAN3-210ENST00000561277 SCN1AP35498 2009 aa21.51■■□□□ 1.03
TSPAN3-210ENST00000561277 H7C4K7 107 aa21.51■■□□□ 1.03
TSPAN3-210ENST00000561277 RFPL2O75678 378 aa21.51■■□□□ 1.03
TSPAN3-210ENST00000561277 NR3C1P04150 777 aa21.51■■□□□ 1.03
TSPAN3-210ENST00000561277 KRT19P08727 400 aa21.51■■□□□ 1.03
TSPAN3-210ENST00000561277 YWHAHQ04917 246 aaPredicted RBP21.51■■□□□ 1.03
TSPAN3-210ENST00000561277 CYP24A1Q07973 514 aa21.51■■□□□ 1.03
TSPAN3-210ENST00000561277 SURF1Q15526 300 aa21.51■■□□□ 1.03
TSPAN3-210ENST00000561277 GUF1Q8N442 669 aaKnown RBP21.51■■□□□ 1.03
TSPAN3-210ENST00000561277 CCDC127Q96BQ5 260 aa21.51■■□□□ 1.03
TSPAN3-210ENST00000561277 SENP8Q96LD8 212 aa21.51■■□□□ 1.03
TSPAN3-210ENST00000561277 GSDMAQ96QA5 445 aa21.51■■□□□ 1.03
TSPAN3-210ENST00000561277 AGAP1Q9UPQ3 857 aa21.51■■□□□ 1.03
TSPAN3-210ENST00000561277 CALUO43852 315 aaPredicted RBP21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 TNNC2P02585 160 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 ODC1P11926 461 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 SSTR3P32745 418 aaPredicted RBP21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 ZP2Q05996 745 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 RAB33AQ14088 237 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 MRPL58Q14197 206 aaKnown RBP21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 PSMD6Q15008 389 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 ZNF280DQ6N043 979 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 USP37Q86T82 979 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 ADHFE1Q8IWW8 467 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 CSGALNACT2Q8N6G5 542 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 ZNF560Q96MR9 790 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 FNBP1Q96RU3 617 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 PLEKHA4Q9H4M7 779 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 INTS13Q9NVM9 706 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 PRKAG3Q9UGI9 489 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 FBXL5Q9UKA1 691 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 FBXW11Q9UKB1 542 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 ITGA11Q9UKX5 1188 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 CUL9Q8IWT3 2517 aa21.5■■□□□ 1.03
TSPAN3-210ENST00000561277 TNNI1P19237 187 aa21.49■■□□□ 1.03
TSPAN3-210ENST00000561277 SP100P23497 879 aaPredicted RBP21.49■■□□□ 1.03
TSPAN3-210ENST00000561277 ROR1Q01973 937 aa21.49■■□□□ 1.03
TSPAN3-210ENST00000561277 SV2CQ496J9 727 aa21.49■■□□□ 1.03
TSPAN3-210ENST00000561277 LIN9Q5TKA1 542 aa21.49■■□□□ 1.03
TSPAN3-210ENST00000561277 SCARA3Q6AZY7 606 aa21.49■■□□□ 1.03
TSPAN3-210ENST00000561277 SLC8B1Q6J4K2 584 aa21.49■■□□□ 1.03
TSPAN3-210ENST00000561277 WDR49Q8IV35 697 aa21.49■■□□□ 1.03
TSPAN3-210ENST00000561277 RIPOR3Q96MK2 946 aa21.49■■□□□ 1.03
TSPAN3-210ENST00000561277 POP1Q99575 1024 aaKnown RBP21.49■■□□□ 1.03
TSPAN3-210ENST00000561277 CCDC195A0A1B0GUA6 201 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 C1RP00736 705 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 DUOXA2Q1HG44 320 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 ZNF658Q5TYW1 1059 aaPredicted RBP21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 CEP135Q66GS9 1140 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 ISM2Q6H9L7 571 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 SLC9A9Q8IVB4 645 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 SPATA20Q8TB22 786 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 HDAC7Q8WUI4 952 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 PHF7Q9BWX1 381 aaPredicted RBP21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 POMKQ9H5K3 350 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 CD320Q9NPF0 282 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 DMAC2Q9NW81 257 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 TRAF3IP3Q9Y228 551 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 R3HCC1Q9Y3T6 440 aaKnown RBP21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 KPNA7A9QM74 516 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 CYB561D2O14569 222 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 TBC1D4O60343 1298 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 PAX3P23760 479 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 PNPLA4P41247 253 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 MTHFRP42898 656 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 CASP4P49662 377 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 BFSP1Q12934 665 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 ATAT1Q5SQI0 421 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 OVOS1Q6IE37 1185 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 GPR149Q86SP6 731 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 GJD3Q8N144 294 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 CXorf38Q8TB03 319 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 RPGRIP1Q96KN7 1286 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 CGRRF1Q99675 332 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 SIX4Q9UIU6 781 aa21.48■■□□□ 1.03
TSPAN3-210ENST00000561277 TSC2P49815 1807 aa21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 WDR27A2RRH5 827 aa21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 OAZ2O95190 189 aa21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 C8AP07357 584 aa21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 CPB1P15086 417 aa21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 TYMPP19971 482 aa21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 NR2F2P24468 414 aa21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 RBP5P82980 135 aa21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 ELOA2Q8IYF1 753 aaPredicted RBP21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 LRRC52Q8N7C0 313 aa21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 SLC7A14Q8TBB6 771 aa21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 MFSD14AQ96MC6 490 aa21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 NECTIN4Q96NY8 510 aa21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 ZDHHC7Q9NXF8 308 aa21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 FRMD4BQ9Y2L6 1034 aa21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 MTCL1Q9Y4B5 1905 aaKnown RBP21.47■■□□□ 1.03
TSPAN3-210ENST00000561277 ARHGEF37A1IGU5 675 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms