RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 MAFFQ9ULX9 164 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 CAMK2AQ9UQM7 478 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 MTO1Q9Y2Z2 717 aaKnown RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 ASB1Q9Y576 335 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 PCDHB4Q9Y5E5 795 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 LYVE1Q9Y5Y7 322 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 KRBA1A5PL33 1030 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CCDC69A6NI79 296 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 TRIM64CA6NLI5 447 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 A8MV72 311 aaPredicted RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 EFCAB8A8MWE9 144 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 SHISA8B8ZZ34 492 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 TISP43B9A030 160 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 B9A039 149 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 NT5C1B-RDH14C9J2C7 533 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 E7EVH7 732 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PYCARD-AS1I3L0S3 204 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 MASP2O00187 686 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 RTCAO00442 366 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 BTN3A1O00481 513 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 VILLO15195 856 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 WDR46O15213 610 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 SEPT4O43236 478 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CCNT2O60583 730 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 BEST1O76090 585 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 GGPS1O95749 300 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PLATP00750 562 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 ALBP02768 609 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 TK1P04183 234 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 ATP5BP06576 529 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 ITGA5P08648 1049 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 NFICP08651 508 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CSH1P0DML2 217 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CSH2P0DML3 217 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 EEF2P13639 858 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 KRT10P13645 584 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 NPR1P16066 1061 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 GLB1P16278 677 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 TPH1P17752 444 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 MALP21145 153 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 EDNRBP24530 442 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PSMA4P25789 261 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 KLRC1P26715 233 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 IL1R2P27930 398 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 AOAHP28039 575 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 GCH1P30793 250 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 HOXD13P35453 343 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PSMC2P35998 433 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 MLH1P40692 756 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PEX19P40855 299 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 EIF2DP41214 584 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 PRPHP41219 470 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PHKA1P46020 1223 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 KCNC1P48547 511 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 SOX8P57073 446 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 HERVK_113P62684 666 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PRR20EP86478 221 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PRR20CP86479 221 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PRR20DP86480 221 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PRR20BP86481 221 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PRR20AP86496 221 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 DSC2Q02487 901 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CREB5Q02930 508 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 GOLGA8FQ08AF8 430 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 MGAT5Q09328 741 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 MGAT2Q10469 447 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 SCAPQ12770 1279 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 FSTL1Q12841 308 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 BFSP1Q12934 665 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 STK4Q13043 487 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CDK5R2Q13319 367 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 SCARB2Q14108 478 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 TRIM25Q14258 630 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 SLC29A2Q14542 456 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CRYMQ14894 314 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 UBE3CQ15386 1083 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 SF3B3Q15393 1217 aaKnown RBP2.24□□□□□ -2.05
RTF1-207ENST00000561076 NFKBIBQ15653 356 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 MAN2A1Q16706 1144 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CYP27C1Q4G0S4 372 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PKDCCQ504Y2 493 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 ARHGAP15Q53QZ3 475 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 BMP2KLQ5H9B9 411 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 ZBTB41Q5SVQ8 909 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CATSPEREQ5SY80 951 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 MAP3K21Q5TCX8 1036 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CDKAL1Q5VV42 579 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 TANGO2Q6ICL3 276 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 NFRKBQ6P4R8 1299 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 TMEM154Q6P9G4 183 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 C11orf88Q6PI97 169 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 SLC30A9Q6PML9 568 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PAOXQ6QHF9 649 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 USP17L6PQ6QN14 398 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 SLC22A25Q6T423 547 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 CYP20A1Q6UW02 462 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 IKBIPQ70UQ0 350 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 TRIM46Q7Z4K8 759 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 GALNT7Q86SF2 657 aa2.24□□□□□ -2.05
RTF1-207ENST00000561076 PRPF39Q86UA1 669 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms