RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 NUB1Q9Y5A7 615 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 BACE2Q9Y5Z0 518 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 PRUNE2Q8WUY3 3088 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 GREB1Q4ZG55 1949 aa10.39□□□□□ -0.75
RABGGTA-221ENST00000561055 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 ARHGEF37A1IGU5 675 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 HIDE1A8MVS5 230 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 KPNA7A9QM74 516 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 PPEF2O14830 753 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 SPTLC1O15269 473 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 PMM2O15305 246 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 TBC1D4O60343 1298 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 OAZ2O95190 189 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 FGFR1OPO95684 399 aaKnown RBP10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 CST3P01034 146 aaPredicted RBP10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 URODP06132 367 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 FAM163BP0C2L3 166 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 DLATP10515 647 aaKnown RBP10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 KRT13P13646 458 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 POLR2BP30876 1174 aaKnown RBP10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 ATICP31939 592 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 TAF6P49848 677 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 HYAL1Q12794 435 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 DUSP6Q16828 381 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 SV2CQ496J9 727 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 TCEAL5Q5H9L2 206 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 RTP2Q5QGT7 225 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 LMBRD2Q68DH5 695 aaPredicted RBP10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 SCARA3Q6AZY7 606 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 KIAA1841Q6NSI8 718 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 CAVIN1Q6NZI2 390 aaKnown RBP10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 SASS6Q6UVJ0 657 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 ANKS3Q6ZW76 656 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 SV2AQ7L0J3 742 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 DPH6Q7L8W6 267 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 ADGRD2Q7Z7M1 963 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 TMEM130Q8N3G9 435 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 EFHBQ8N7U6 833 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 MAFAQ8NHW3 353 aaPredicted RBP10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 SPATA18Q8TC71 538 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 MICAL1Q8TDZ2 1067 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 SENP8Q96LD8 212 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 KLHL5Q96PQ7 755 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 SRRTQ9BXP5 876 aaKnown RBP10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 OXCT2Q9BYC2 517 aaPredicted RBP10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 ENTPD7Q9NQZ7 604 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 AGAP1Q9UPQ3 857 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 VCANP13611 3396 aa10.38□□□□□ -0.75
RABGGTA-221ENST00000561055 ZNF638Q14966 1978 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 STX10O60499 249 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 CLASP2O75122 1294 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 PAPLNO95428 1278 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 CNPP09543 421 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 TKTP29401 623 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 STX17P56962 302 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 PPP3CAQ08209 521 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 MYO1EQ12965 1108 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 ADAM15Q13444 863 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 STX1AQ16623 288 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 TDRD10Q5VZ19 366 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 PLPP4Q5VZY2 271 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 PPFIBP1Q86W92 1011 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 TRIM59Q8IWR1 403 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 APPL2Q8NEU8 664 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 ENOX1Q8TC92 643 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 SLC22A17Q8WUG5 538 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 AUTS2Q8WXX7 1259 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 TAF4BQ92750 862 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 SLC35C1Q96A29 364 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 EEF2KMTQ96G04 330 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 FAXDC2Q96IV6 333 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 NOTCH4Q99466 2003 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 CLSTN3Q9BQT9 956 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 FUCA2Q9BTY2 467 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 EMILIN2Q9BXX0 1053 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 XYLT2Q9H1B5 865 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 TLE6Q9H808 572 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 TMEM8AQ9HCN3 771 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 ANO10Q9NW15 660 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 MTRRQ9UBK8 725 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 ARMCX3Q9UH62 379 aaPredicted RBP10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 DSEQ9UL01 958 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 COQ4Q9Y3A0 265 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 PCDHGC5Q9Y5F6 944 aa10.37□□□□□ -0.75
RABGGTA-221ENST00000561055 DENND4AQ7Z401 1863 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 H7C4K7 107 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 I3L4J1 428 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 CYB561D2O14569 222 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 TEX28O15482 410 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 VNN1O95497 513 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 KRT19P08727 400 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 ODC1P11926 461 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 PRKCSHP14314 528 aaPredicted RBP10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 NRIP1P48552 1158 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 NDUFV1P49821 464 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 YWHAHQ04917 246 aaPredicted RBP10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 TYRO3Q06418 890 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 RAB33AQ14088 237 aa10.36□□□□□ -0.75
RABGGTA-221ENST00000561055 NFKBIBQ15653 356 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms