RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 TAS2R1Q9NYW7 299 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 CDK5RAP2Q96SN8 1893 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 GOLGA8SH3BPF8 625 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 GOLGA8MH3BSY2 632 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 TYROBPO43914 113 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 ESRRAP11474 423 aaPredicted RBP17.44■□□□□ 0.38
TPM1-228ENST00000560975 CD58P19256 250 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 IKQ13123 557 aaPredicted RBP17.44■□□□□ 0.38
TPM1-228ENST00000560975 EFTUD2Q15029 972 aaKnown RBP eCLIP17.44■□□□□ 0.381e-5■■■□□ 16.7
TPM1-228ENST00000560975 MOXD1Q6UVY6 613 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 ZCCHC9Q8N567 271 aaKnown RBP17.44■□□□□ 0.38
TPM1-228ENST00000560975 TUBGCP5Q96RT8 1024 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 NDNQ99608 321 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 CD209Q9NNX6 404 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 ARMCX1Q9P291 453 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 PDP2Q9P2J9 529 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 STX18Q9P2W9 335 aaKnown RBP17.44■□□□□ 0.38
TPM1-228ENST00000560975 USTQ9Y2C2 406 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 MYH11P35749 1972 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 STRCP1A6NGW2 1772 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 K7ENM7 598 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 MXI1P50539 228 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 GABPAQ06546 454 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 AP3B2Q13367 1082 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 MTM1Q13496 603 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 SLC15A2Q16348 729 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 KAZNQ674X7 775 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 BBOF1Q8ND07 529 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 PTPRN2Q92932 1015 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 FAM161BQ96MY7 647 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 CYTH2Q99418 400 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 GLT8D2Q9H1C3 349 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 DDX4Q9NQI0 724 aaKnown RBP17.44■□□□□ 0.38
TPM1-228ENST00000560975 LMCD1Q9NZU5 365 aa17.44■□□□□ 0.38
TPM1-228ENST00000560975 ABHD2P08910 425 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 ARFIP2P53365 341 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 UBXN2AP68543 259 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 C1orf220Q5T0J3 134 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 SYDE2Q5VT97 1194 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 IZUMO2Q6UXV1 221 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 LINC00116Q8NCU8 138 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 HSD17B14Q9BPX1 270 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 TMX4Q9H1E5 349 aaPredicted RBP17.43■□□□□ 0.38
TPM1-228ENST00000560975 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.43■□□□□ 0.38
TPM1-228ENST00000560975 PIK3CDO00329 1044 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 KCNQ2O43526 872 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 BAG2O95816 211 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 PYGBP11216 843 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 PGM1P36871 562 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 ZFYVE27Q5T4F4 411 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 ANKS1BQ7Z6G8 1248 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 DDX27Q96GQ7 796 aaKnown RBP17.43■□□□□ 0.38
TPM1-228ENST00000560975 TRIM55Q9BYV6 548 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 NYXQ9GZU5 481 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 DMAP1Q9NPF5 467 aaPredicted RBP17.43■□□□□ 0.38
TPM1-228ENST00000560975 WRAP73Q9P2S5 460 aaPredicted RBP17.43■□□□□ 0.38
TPM1-228ENST00000560975 SLC17A7Q9P2U7 560 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 SERPINB13Q9UIV8 391 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 PLIN4Q96Q06 1357 aa17.43■□□□□ 0.38
TPM1-228ENST00000560975 HNRNPCL1O60812 293 aaKnown RBP17.42■□□□□ 0.38
TPM1-228ENST00000560975 EEF2P13639 858 aaKnown RBP17.42■□□□□ 0.38
TPM1-228ENST00000560975 KRT5P13647 590 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 RTP1P59025 263 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 ZC3H12AQ5D1E8 599 aaKnown RBP17.42■□□□□ 0.38
TPM1-228ENST00000560975 MDH1BQ5I0G3 518 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 ACAD10Q6JQN1 1059 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 CPA5Q8WXQ8 436 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 SEMA4DQ92854 862 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 CCDC127Q96BQ5 260 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 TMEM120AQ9BXJ8 343 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 FDX1P10109 184 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 CCDC62Q6P9F0 684 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 TRMT1LQ7Z2T5 733 aaKnown RBP17.42■□□□□ 0.38
TPM1-228ENST00000560975 TCP10LQ8TDR4 215 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 TTC1Q99614 292 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 DAGLAQ9Y4D2 1042 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 SPATA31A5Q5VU36 1347 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 SPATA31A6Q5VVP1 1343 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 SPATA31A7Q8IWB4 1347 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 TAF1LQ8IZX4 1826 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 F5H6K3 240 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 PI4K2BG5E9Z4 385 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 UFL1O94874 794 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 KLRC2P26717 231 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 SHMT1P34896 483 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 SREBF1P36956 1147 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 CENPCQ03188 943 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 GPS1Q13098 491 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 TPTE2Q6XPS3 522 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 OSBPL8Q9BZF1 889 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 FAM192AQ9GZU8 254 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 ZNF148Q9UQR1 794 aa17.42■□□□□ 0.38
TPM1-228ENST00000560975 USP1O94782 785 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 KRT10P13645 584 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 ADRA2BP18089 450 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 ADSSP30520 456 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 PDIA2Q13087 525 aaKnown RBP17.41■□□□□ 0.38
TPM1-228ENST00000560975 CCNG2Q16589 344 aa17.41■□□□□ 0.38
TPM1-228ENST00000560975 TAB3Q8N5C8 712 aaPredicted RBP17.41■□□□□ 0.38
TPM1-228ENST00000560975 MANSC1Q9H8J5 431 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms