RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 CYP26A1O43174 497 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 AKR1B10O60218 316 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 PQBP1O60828 265 aaKnown RBP12.11□□□□□ -0.47
SNX1-212ENST00000560861 CXCL10P02778 98 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 CCDC172P0C7W6 258 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 ZSCAN20P17040 1043 aaPredicted RBP12.11□□□□□ -0.47
SNX1-212ENST00000560861 VAV2P52735 878 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 KRT83P78385 493 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 GFPT1Q06210 699 aaPredicted RBP12.11□□□□□ -0.47
SNX1-212ENST00000560861 BMS1Q14692 1282 aaKnown RBP12.11□□□□□ -0.47
SNX1-212ENST00000560861 PLEKHG4Q58EX7 1191 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 C9orf57Q5W0N0 161 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 LIMS2Q7Z4I7 341 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 ECHDC2Q86YB7 292 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 PALB2Q86YC2 1186 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 LRRC52Q8N7C0 313 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 BEST2Q8NFU1 509 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 SLC20A1Q8WUM9 679 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 LPPQ93052 612 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 VWCEQ96DN2 955 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 HPDLQ96IR7 371 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 ZFP42Q96MM3 310 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 AGPAT1Q99943 283 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 IFIH1Q9BYX4 1025 aaKnown RBP12.11□□□□□ -0.47
SNX1-212ENST00000560861 IMPG2Q9BZV3 1241 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 LACRTQ9GZZ8 138 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
SNX1-212ENST00000560861 ACP6Q9NPH0 428 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 RNF19AQ9NV58 838 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 MIOSQ9NXC5 875 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 NAGPAQ9UK23 515 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 PCDHA13Q9Y5I0 950 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 PDE4DIPQ5VU43 2346 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 LTBP2Q14767 1821 aa12.11□□□□□ -0.47
SNX1-212ENST00000560861 FANCGO15287 622 aa12.1□□□□□ -0.47
SNX1-212ENST00000560861 SKIP12755 728 aa12.1□□□□□ -0.47
SNX1-212ENST00000560861 CYP11B1P15538 503 aa12.1□□□□□ -0.47
SNX1-212ENST00000560861 AFF1P51825 1210 aaKnown RBP12.1□□□□□ -0.47
SNX1-212ENST00000560861 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
SNX1-212ENST00000560861 FMO1Q01740 532 aa12.1□□□□□ -0.47
SNX1-212ENST00000560861 ZNF667Q5HYK9 610 aa12.1□□□□□ -0.47
SNX1-212ENST00000560861 SLC47A2Q86VL8 602 aa12.1□□□□□ -0.47
SNX1-212ENST00000560861 HACE1Q8IYU2 909 aa12.1□□□□□ -0.47
SNX1-212ENST00000560861 RBBP8NLQ8NC74 664 aaPredicted RBP12.1□□□□□ -0.47
SNX1-212ENST00000560861 WHAMMQ8TF30 809 aa12.1□□□□□ -0.47
SNX1-212ENST00000560861 PCDHB18PQ96TA0 734 aa12.1□□□□□ -0.47
SNX1-212ENST00000560861 GAD1Q99259 594 aa12.1□□□□□ -0.47
SNX1-212ENST00000560861 FAM124BQ9H5Z6 455 aaPredicted RBP12.1□□□□□ -0.47
SNX1-212ENST00000560861 SMYD3Q9H7B4 428 aa12.1□□□□□ -0.47
SNX1-212ENST00000560861 CYP3A43Q9HB55 503 aa12.1□□□□□ -0.47
SNX1-212ENST00000560861 ADAMTS1Q9UHI8 967 aa12.1□□□□□ -0.47
SNX1-212ENST00000560861 TFR2Q9UP52 801 aa12.1□□□□□ -0.47
SNX1-212ENST00000560861 TSC2P49815 1807 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 MYH10P35580 1976 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 DNAH12Q6ZR08 3092 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 ARL5CA6NH57 179 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 DCDC2CA8MYV0 355 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 SPTLC1O15269 473 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 XPOTO43592 962 aaKnown RBP12.09□□□□□ -0.47
SNX1-212ENST00000560861 KRT19P08727 400 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 MLH1P40692 756 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 MAGEA1P43355 309 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 CDR2Q01850 454 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 INCA1Q0VD86 236 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 UBE2Q1Q7Z7E8 422 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 GLYCTKQ8IVS8 523 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 CRIPAKQ8N1N5 446 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 ZSWIM1Q9BR11 485 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 FTHL17Q9BXU8 183 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 DEF6Q9H4E7 631 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 C11orf49Q9H6J7 331 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 RSAD1Q9HA92 442 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 CISHQ9NSE2 258 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 TRIM10Q9UDY6 481 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 PCDHB4Q9Y5E5 795 aa12.09□□□□□ -0.47
SNX1-212ENST00000560861 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.09□□□□□ -0.47
SNX1-212ENST00000560861 COL4A6Q14031 1691 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 CILPO75339 1184 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 OFD1O75665 1012 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 EOMESO95936 686 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 CALCAP01258 141 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 WEE2P0C1S8 567 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 USP8P40818 1118 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 RAP1GAPP47736 663 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 BPIFB4P59827 614 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 SPA17Q15506 151 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 LRRC26Q2I0M4 334 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 WDR72Q3MJ13 1102 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 C10orf76Q5T2E6 689 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 ALKBH5Q6P6C2 394 aaKnown RBP12.08□□□□□ -0.48
SNX1-212ENST00000560861 TMEM270Q6UE05 265 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 SCARA5Q6ZMJ2 495 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 SLC24A5Q71RS6 500 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 VPS36Q86VN1 386 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 ZNF677Q86XU0 584 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 RPUSD2Q8IZ73 545 aaKnown RBP12.08□□□□□ -0.48
SNX1-212ENST00000560861 DBF4BQ8NFT6 615 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 PGBD4Q96DM1 585 aa12.08□□□□□ -0.48
SNX1-212ENST00000560861 PAWRQ96IZ0 340 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms