RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 BAP1Q92560 729 aa8.69□□□□□ -1.02
CPNE6-218ENST00000560845 CLP1Q92989 425 aaKnown RBP8.69□□□□□ -1.02
CPNE6-218ENST00000560845 TMEM117Q9H0C3 514 aa8.69□□□□□ -1.02
CPNE6-218ENST00000560845 NUCKS1Q9H1E3 243 aaKnown RBP8.69□□□□□ -1.02
CPNE6-218ENST00000560845 PDE11AQ9HCR9 933 aa8.69□□□□□ -1.02
CPNE6-218ENST00000560845 SIX2Q9NPC8 291 aa8.69□□□□□ -1.02
CPNE6-218ENST00000560845 CD207Q9UJ71 328 aa8.69□□□□□ -1.02
CPNE6-218ENST00000560845 FBXL5Q9UKA1 691 aa8.69□□□□□ -1.02
CPNE6-218ENST00000560845 CPSF3Q9UKF6 684 aaKnown RBP8.69□□□□□ -1.02
CPNE6-218ENST00000560845 PPP2R2CQ9Y2T4 447 aa8.69□□□□□ -1.02
CPNE6-218ENST00000560845 FHOD1Q9Y613 1164 aa8.69□□□□□ -1.02
CPNE6-218ENST00000560845 CDY2AQ9Y6F7 541 aa8.69□□□□□ -1.02
CPNE6-218ENST00000560845 TRIOO75962 3097 aa8.69□□□□□ -1.02
CPNE6-218ENST00000560845 C5orf42Q9H799 3197 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 SOWAHDA6NJG2 315 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 LINC01565O15544 149 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 IL18RAPO95256 599 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 CLTAP09496 248 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 CXCL8P10145 99 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 TNNI1P19237 187 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 AXLP30530 894 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 HNRNPH3P31942 346 aaKnown RBP8.68□□□□□ -1.02
CPNE6-218ENST00000560845 PIK3CAP42336 1068 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 AP3M2P53677 418 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 WNT7BP56706 349 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 OSTNP61366 133 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 ETF1P62495 437 aaKnown RBP8.68□□□□□ -1.02
CPNE6-218ENST00000560845 CLDN10P78369 228 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 MGAT3Q09327 533 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 BIRC3Q13489 604 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 RAPGEF1Q13905 1077 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 BTG3Q14201 252 aaPredicted RBP8.68□□□□□ -1.02
CPNE6-218ENST00000560845 LPIN1Q14693 890 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 MTF1Q14872 753 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 ENOX2Q16206 610 aaKnown RBP8.68□□□□□ -1.02
CPNE6-218ENST00000560845 ASIC2Q16515 512 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 MEA1Q16626 185 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 LMBRD2Q68DH5 695 aaPredicted RBP8.68□□□□□ -1.02
CPNE6-218ENST00000560845 IQCEQ6IPM2 695 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 DPY19L2P1Q6NXN4 242 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 NOTUMQ6P988 496 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 RAD9BQ6WBX8 426 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 SYT10Q6XYQ8 523 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 SV2AQ7L0J3 742 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 MTERF4Q7Z6M4 381 aaKnown RBP8.68□□□□□ -1.02
CPNE6-218ENST00000560845 WDR49Q8IV35 697 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 CEP120Q8N960 986 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 EHBP1Q8NDI1 1231 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 FBXL13Q8NEE6 735 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 TAS1R2Q8TE23 839 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 TMEM40Q8WWA1 233 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 ZNF592Q92610 1267 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 SPAG5Q96R06 1193 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 PLVAPQ9BX97 442 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 CELF4Q9BZC1 486 aaKnown RBP8.68□□□□□ -1.02
CPNE6-218ENST00000560845 IGFLR1Q9H665 355 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 RPF1Q9H9Y2 349 aaKnown RBP8.68□□□□□ -1.02
CPNE6-218ENST00000560845 CDHR5Q9HBB8 845 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 APEX2Q9UBZ4 518 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 MYO6Q9UM54 1294 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 PIN4Q9Y237 131 aaKnown RBP8.68□□□□□ -1.02
CPNE6-218ENST00000560845 COQ4Q9Y3A0 265 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 PTPRJQ12913 1337 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 RALGAPA2Q2PPJ7 1873 aa8.68□□□□□ -1.02
CPNE6-218ENST00000560845 A0A0U1RQJ8 604 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 A0A1B0GUA9 196 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 CCP110O43303 1012 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 TECTAO75443 2155 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 NPTXRO95502 500 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 STAG3L1P0CL83 205 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 GRM5P41594 1212 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 NDUFV1P49821 464 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 CDK17Q00537 523 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 POU5F1Q01860 360 aaKnown RBP8.67□□□□□ -1.02
CPNE6-218ENST00000560845 CAMK1Q14012 370 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 ZACNQ401N2 412 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 TDRD12Q587J7 1177 aaKnown RBP8.67□□□□□ -1.02
CPNE6-218ENST00000560845 SFMBT2Q5VUG0 894 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 TDRD10Q5VZ19 366 aaKnown RBP8.67□□□□□ -1.02
CPNE6-218ENST00000560845 SLC27A1Q6PCB7 646 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 GJB7Q6PEY0 223 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 WDR59Q6PJI9 974 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 C15orf39Q6ZRI6 1047 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 FAM228AQ86W67 206 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 FMNL3Q8IVF7 1028 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 PRSS33Q8NF86 280 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 KIF18AQ8NI77 898 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 LMO3Q8TAP4 145 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 ATRIPQ8WXE1 791 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 SYN2Q92777 582 aaPredicted RBP8.67□□□□□ -1.02
CPNE6-218ENST00000560845 EDAQ92838 391 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 PPP2R3CQ969Q6 453 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 ZNF689Q96CS4 500 aaPredicted RBP8.67□□□□□ -1.02
CPNE6-218ENST00000560845 FAM212AQ96EL1 285 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 MSLNLQ96KJ4 702 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 FAM84AQ96KN4 292 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 NT5C1BQ96P26 610 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 PHOX2BQ99453 314 aa8.67□□□□□ -1.02
CPNE6-218ENST00000560845 CCDC94Q9BW85 323 aaPredicted RBP8.67□□□□□ -1.02
CPNE6-218ENST00000560845 MTMR12Q9C0I1 747 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms