RNA–Protein interactions for RNA: ENST00000560555.1

ALDH1A3-206, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best)

Gene ALDH1A3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-206ENST00000560555 BARX2Q9UMQ3 279 aaPredicted RBP13.19□□□□□ -0.3
ALDH1A3-206ENST00000560555 DERAQ9Y315 318 aa13.19□□□□□ -0.3
ALDH1A3-206ENST00000560555 C2CD2Q9Y426 696 aa13.19□□□□□ -0.3
ALDH1A3-206ENST00000560555 C2orf16Q68DN1 1984 aa13.19□□□□□ -0.3
ALDH1A3-206ENST00000560555 TSC2P49815 1807 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 PPP1R3GB7ZBB8 358 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 M0QZQ0 153 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 PAPLNO95428 1278 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 LDHAP00338 332 aaKnown RBP13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 CST3P01034 146 aaPredicted RBP13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 NBL1P41271 181 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 GLUD2P49448 558 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 CLCN4P51793 760 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 LILRA4P59901 499 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 CLDN10P78369 228 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 USP41Q3LFD5 358 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 COBLL1Q53SF7 1204 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 LMBRD2Q68DH5 695 aaPredicted RBP13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 CENPPQ6IPU0 288 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 PIK3R5Q8WYR1 880 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 SUSD3Q96L08 255 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 CDCA3Q99618 268 aaPredicted RBP13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 RBAKQ9NYW8 714 aaPredicted RBP13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 FNIP2Q9P278 1114 aa13.18□□□□□ -0.3
ALDH1A3-206ENST00000560555 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 ZNF233A6NK53 670 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 KIAA0391O15091 583 aaKnown RBP13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 GALR2O43603 387 aaPredicted RBP13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 IL18RAPO95256 599 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 CYP2J2P51589 502 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 DLG4P78352 724 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 CYP24A1Q07973 514 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 MORC3Q14149 939 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 TMEM132DQ14C87 1099 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 SNRNP35Q16560 246 aaKnown RBP13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 NFIL3Q16649 462 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 ZNF658Q5TYW1 1059 aaPredicted RBP13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 ANKRD54Q6NXT1 300 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 STXBP4Q6ZWJ1 553 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 ZC3H3Q8IXZ2 948 aaKnown RBP13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 ADSSL1Q8N142 457 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 XXYLT1Q8NBI6 393 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 GPT2Q8TD30 523 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 RIN2Q8WYP3 895 aaPredicted RBP13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 RTP3Q9BQQ7 232 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 TTPALQ9BTX7 342 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 MRPL17Q9NRX2 175 aaKnown RBP13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 INTS13Q9NVM9 706 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 DPP3Q9NY33 737 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 CGNQ9P2M7 1197 aaKnown RBP13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 MTRRQ9UBK8 725 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 ZDBF2Q9HCK1 2354 aa13.17□□□□□ -0.3
ALDH1A3-206ENST00000560555 SF3B1O75533 1304 aaKnown RBP eCLIP13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 ZFHX2Q9C0A1 2572 aaPredicted RBP13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 TRIOO75962 3097 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 MED19A0JLT2 244 aaPredicted RBP13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 AKAP3O75969 853 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 VNN2O95498 520 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 NR3C1P04150 777 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 SPATA31D3P0C874 917 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 NDUFV1P49821 464 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 PSMD6Q15008 389 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 CAMK4Q16566 473 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 ANKRD40Q6AI12 368 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 LLGL2Q6P1M3 1020 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 SPATA31D4Q6ZUB0 917 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 LIMS2Q7Z4I7 341 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 NT5DC4Q86YG4 428 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 C12orf76Q8N812 135 aaPredicted RBP13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 PARD3BQ8TEW8 1205 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 SUSD6Q92537 303 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 NME7Q9Y5B8 376 aa13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 TIMM13Q9Y5L4 95 aaPredicted RBP13.16□□□□□ -0.3
ALDH1A3-206ENST00000560555 TGM5O43548 720 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 OAZ2O95190 189 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 C4BPAP04003 597 aaKnown RBP13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 RAB33AQ14088 237 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 MYBPC2Q14324 1141 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 VARS2Q5ST30 1063 aaKnown RBP13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 C15orf39Q6ZRI6 1047 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 CEP57Q86XR8 500 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 PALB2Q86YC2 1186 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 SMRP1Q8NCR6 262 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 BEST2Q8NFU1 509 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 NKD2Q969F2 451 aaPredicted RBP13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 SMARCE1Q969G3 411 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 EEF2KMTQ96G04 330 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 SENP8Q96LD8 212 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 DUSP9Q99956 384 aaKnown RBP13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 MTMR12Q9C0I1 747 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 KIAA1586Q9HCI6 787 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 STK39Q9UEW8 545 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 BACE2Q9Y5Z0 518 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 MYO10Q9HD67 2058 aa13.15□□□□□ -0.3
ALDH1A3-206ENST00000560555 TRIM49BA6NDI0 452 aa13.14□□□□□ -0.31
ALDH1A3-206ENST00000560555 LRRIQ3A6PVS8 624 aaPredicted RBP13.14□□□□□ -0.31
ALDH1A3-206ENST00000560555 SYN3O14994 580 aa13.14□□□□□ -0.31
ALDH1A3-206ENST00000560555 LRRN2O75325 713 aa13.14□□□□□ -0.31
ALDH1A3-206ENST00000560555 ABLIM3O94929 683 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms