RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	PGBD1	Q96JS3	809 aa		4.92	□□□□□ -1.62
SLTM-223	ENST00000560532	ACAP3	Q96P50	834 aa		4.92	□□□□□ -1.62
SLTM-223	ENST00000560532		A0A1W2PS29	197 aa		4.91	□□□□□ -1.62
SLTM-223	ENST00000560532	TCRBV7S2A1N4T	A0A589	114 aa		4.91	□□□□□ -1.62
SLTM-223	ENST00000560532	GCOM1	H8Y6P7	765 aa	Predicted RBP	4.91	□□□□□ -1.62
SLTM-223	ENST00000560532	ID4	P47928	161 aa		4.91	□□□□□ -1.62
SLTM-223	ENST00000560532	ADRM1	Q16186	407 aa		4.91	□□□□□ -1.62
SLTM-223	ENST00000560532	SLC44A4	Q53GD3	710 aa		4.91	□□□□□ -1.62
SLTM-223	ENST00000560532	SLC18B1	Q6NT16	456 aa		4.91	□□□□□ -1.62
SLTM-223	ENST00000560532	FAM180A	Q6UWF9	173 aa		4.91	□□□□□ -1.62
SLTM-223	ENST00000560532	SAMD14	Q8IZD0	417 aa	Predicted RBP	4.91	□□□□□ -1.62
SLTM-223	ENST00000560532	CLRN3	Q8NCR9	226 aa		4.91	□□□□□ -1.62
SLTM-223	ENST00000560532	TSPEAR	Q8WU66	669 aa		4.91	□□□□□ -1.62
SLTM-223	ENST00000560532	TGFBRAP1	Q8WUH2	860 aa		4.91	□□□□□ -1.62
SLTM-223	ENST00000560532	QRSL1	Q9H0R6	528 aa	Known RBP	4.91	□□□□□ -1.62
SLTM-223	ENST00000560532	TMEM140	Q9NV12	185 aa		4.91	□□□□□ -1.62
SLTM-223	ENST00000560532	PRAMEF33	A0A0G2JMD5	474 aa		4.9	□□□□□ -1.63
SLTM-223	ENST00000560532	NEMP1	O14524	444 aa		4.9	□□□□□ -1.63
SLTM-223	ENST00000560532	PRAMEF10	O60809	474 aa		4.9	□□□□□ -1.63
SLTM-223	ENST00000560532	TOP3B	O95985	862 aa	Known RBP	4.9	□□□□□ -1.63
SLTM-223	ENST00000560532	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
SLTM-223	ENST00000560532	CYP2D6	P10635	497 aa		4.9	□□□□□ -1.63
SLTM-223	ENST00000560532	BPI	P17213	487 aa		4.9	□□□□□ -1.63
SLTM-223	ENST00000560532	CERS1	P27544	350 aa		4.9	□□□□□ -1.63
SLTM-223	ENST00000560532	PCSK1	P29120	753 aa		4.9	□□□□□ -1.63
SLTM-223	ENST00000560532	CLNK	Q7Z7G1	428 aa		4.9	□□□□□ -1.63
SLTM-223	ENST00000560532	CMIP	Q8IY22	773 aa		4.9	□□□□□ -1.63
SLTM-223	ENST00000560532	AUTS2	Q8WXX7	1259 aa		4.9	□□□□□ -1.63
SLTM-223	ENST00000560532	FATE1	Q969F0	183 aa		4.9	□□□□□ -1.63
SLTM-223	ENST00000560532	DMRT3	Q9NQL9	472 aa		4.9	□□□□□ -1.63
SLTM-223	ENST00000560532		A0A087X0B3	334 aa		4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	GOLGA8A	A7E2F4	631 aa		4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	VWC2L	B2RUY7	222 aa		4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	PRR23D1	E9PI22	279 aa	Predicted RBP	4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	KIAA0391	O15091	583 aa	Known RBP	4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	PDE8A	O60658	829 aa		4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	URI1	O94763	535 aa	Predicted RBP	4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	TTLL1	O95922	423 aa		4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	MYCLP1	P12525	358 aa	Predicted RBP	4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	PPP3CB	P16298	524 aa		4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	SESN3	P58005	492 aa		4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	RPS7	P62081	194 aa	Known RBP	4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	MRPS9	P82933	396 aa	Known RBP	4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	PREPL	Q4J6C6	727 aa	Predicted RBP	4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	MUM1L1	Q5H9M0	696 aa		4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	TLR10	Q9BXR5	811 aa		4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	GREM2	Q9H772	168 aa		4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	IFT122	Q9HBG6	1241 aa		4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	RBM12	Q9NTZ6	932 aa	Known RBP	4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	CDYL	Q9Y232	598 aa		4.89	□□□□□ -1.63
SLTM-223	ENST00000560532	TARM1	B6A8C7	271 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	TEX33	O43247	280 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	IGSF3	O75054	1194 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	ULK1	O75385	1050 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	GSPT1	P15170	499 aa	Known RBP	4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	KCNA2	P16389	499 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	DRD4	P21917	467 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	HSD3B2	P26439	372 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	MMP13	P45452	471 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	PPP3CA	Q08209	521 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	MUM1	Q2TAK8	710 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	CEP78	Q5JTW2	689 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	SDE2	Q6IQ49	451 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	ZDHHC17	Q8IUH5	632 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	B3GALNT2	Q8NCR0	500 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	CASKIN2	Q8WXE0	1202 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	HOXB13	Q92826	284 aa	Predicted RBP	4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	ACE2	Q9BYF1	805 aa	Predicted RBP	4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	IFT22	Q9H7X7	185 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	VSX1	Q9NZR4	365 aa	Predicted RBP	4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	SCOC	Q9UIL1	159 aa		4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	TMA7	Q9Y2S6	64 aa	Known RBP	4.88	□□□□□ -1.63
SLTM-223	ENST00000560532	PPP6C	O00743	305 aa		4.87	□□□□□ -1.63
SLTM-223	ENST00000560532	EBLN1	P0CF75	366 aa		4.87	□□□□□ -1.63
SLTM-223	ENST00000560532	NR4A2	P43354	598 aa		4.87	□□□□□ -1.63
SLTM-223	ENST00000560532	CCT8	P50990	548 aa		4.87	□□□□□ -1.63
SLTM-223	ENST00000560532	GYS2	P54840	703 aa		4.87	□□□□□ -1.63
SLTM-223	ENST00000560532	DHCR24	Q15392	516 aa		4.87	□□□□□ -1.63
SLTM-223	ENST00000560532	TOR2A	Q5JU69	321 aa		4.87	□□□□□ -1.63
SLTM-223	ENST00000560532	HMCES	Q96FZ2	354 aa		4.87	□□□□□ -1.63
SLTM-223	ENST00000560532	TTC1	Q99614	292 aa		4.87	□□□□□ -1.63
SLTM-223	ENST00000560532	EBF3	Q9H4W6	596 aa		4.87	□□□□□ -1.63
SLTM-223	ENST00000560532	WWOX	Q9NZC7	414 aa		4.87	□□□□□ -1.63
SLTM-223	ENST00000560532	NR2E3	Q9Y5X4	410 aa		4.87	□□□□□ -1.63
SLTM-223	ENST00000560532	IGKV2D-30	A0A075B6S6	120 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	GPR32	O75388	356 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	SFPQ	P23246	707 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	CCKAR	P32238	428 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	HNRNPM	P52272	730 aa	Known RBP eCLIP	4.86	□□□□□ -1.63	6e-9	■■■■■ 29.9
SLTM-223	ENST00000560532	SCAND1	P57086	179 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	RABEP1	Q15276	862 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	PROSER3	Q2NL68	480 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	MIDN	Q504T8	468 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	GJC2	Q5T442	439 aa	Predicted RBP	4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	DDX46	Q7L014	1031 aa	Known RBP	4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	ADGRG5	Q8IZF4	528 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	SMRP1	Q8NCR6	262 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	CCHCR1	Q8TD31	782 aa		4.86	□□□□□ -1.63
SLTM-223	ENST00000560532	ADI1	Q9BV57	179 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms