RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PCSK7Q16549 785 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 NBPF12Q5TAG4 269 aaPredicted RBP14.14□□□□□ -0.15
TRAF3-208ENST00000560371 EML4Q9HC35 981 aaKnown RBP14.14□□□□□ -0.15
TRAF3-208ENST00000560371 ADGRG1Q9Y653 693 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 CCDC195A0A1B0GUA6 201 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 PDIA6Q15084 440 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 TMEM259Q4ZIN3 620 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 TBX20Q9UMR3 447 aa14.14□□□□□ -0.15
TRAF3-208ENST00000560371 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.14□□□□□ -0.15
TRAF3-208ENST00000560371 GRAMD1BQ3KR37 738 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 COBLL1Q53SF7 1204 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 CYP4A22Q5TCH4 519 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 ADCK2Q7Z695 626 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 TEKT4Q8WW24 435 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 SMYD3Q9H7B4 428 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 RRAGCQ9HB90 399 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 EEF2KO00418 725 aaKnown RBP14.13□□□□□ -0.15
TRAF3-208ENST00000560371 BRAFP15056 766 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 ATN1P54259 1190 aaPredicted RBP14.13□□□□□ -0.15
TRAF3-208ENST00000560371 KIZQ2M2Z5 673 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 MLXIPLQ9NP71 852 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 MRPL40Q9NQ50 206 aaKnown RBP14.13□□□□□ -0.15
TRAF3-208ENST00000560371 ANLNQ9NQW6 1124 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 ANGPTL2Q9UKU9 493 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 YY1P25490 414 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 RRM2BQ7LG56 351 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 SPATA18Q8TC71 538 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 NIF3L1Q9GZT8 377 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 RPLP2P05387 115 aaKnown RBP14.13□□□□□ -0.15
TRAF3-208ENST00000560371 WASHC5Q12768 1159 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 DPYDQ12882 1025 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 FAM83AQ86UY5 434 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 CHSY1Q86X52 802 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 SENP1Q9P0U3 644 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 CPA4Q9UI42 421 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 VCAM1P19320 739 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 BLVRAP53004 296 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 GLRA4Q5JXX5 417 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 SPDYAQ5MJ70 313 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 GPAT2Q6NUI2 795 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 L3MBTL3Q96JM7 780 aaPredicted RBP14.13□□□□□ -0.15
TRAF3-208ENST00000560371 PI4K2AQ9BTU6 479 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 KIFC3Q9BVG8 833 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 YIPF2Q9BWQ6 316 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 GPR63Q9BZJ6 419 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 STARD7Q9NQZ5 370 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 HDAC6Q9UBN7 1215 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 AMACRQ9UHK6 382 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 DCTN4Q9UJW0 460 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 MUTP22033 750 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 AARSP49588 968 aaKnown RBP eCLIP14.13□□□□□ -0.15
TRAF3-208ENST00000560371 ZNF484Q5JVG2 852 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 BHMTQ93088 406 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 LRRC37BQ96QE4 947 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 DPP3Q9NY33 737 aa14.13□□□□□ -0.15
TRAF3-208ENST00000560371 DDNO94850 711 aaPredicted RBP14.12□□□□□ -0.15
TRAF3-208ENST00000560371 NCAPHQ15003 741 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 PAN2Q504Q3 1202 aaKnown RBP14.12□□□□□ -0.15
TRAF3-208ENST00000560371 POLR3CQ9BUI4 534 aaPredicted RBP14.12□□□□□ -0.15
TRAF3-208ENST00000560371 TMEM60Q9H2L4 133 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 HMOX2P30519 316 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 GALCP54803 685 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 FBXO16Q8IX29 292 aaPredicted RBP14.12□□□□□ -0.15
TRAF3-208ENST00000560371 ADSSL1Q8N142 457 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 ARHGAP18Q8N392 663 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 UBA3Q8TBC4 463 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 TMEM117Q9H0C3 514 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 GOLGA7BQ2TAP0 167 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 CDR2LQ86X02 465 aaPredicted RBP14.12□□□□□ -0.15
TRAF3-208ENST00000560371 ARHGEF26Q96DR7 871 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 RGL2O15211 777 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 KCNA2P16389 499 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 AMHR2Q16671 573 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 MTHFD1LQ6UB35 978 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 HS6ST3Q8IZP7 471 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 PTPRN2Q92932 1015 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 CHP1Q99653 195 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 ADA2Q9NZK5 511 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 LIMA1Q9UHB6 759 aaKnown RBP14.12□□□□□ -0.15
TRAF3-208ENST00000560371 HOXA2O43364 376 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 CXCL9Q07325 125 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 CDH18Q13634 790 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 USP33Q8TEY7 942 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 CYTH2Q99418 400 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 ZC3H11AO75152 810 aaKnown RBP eCLIP14.12□□□□□ -0.15
TRAF3-208ENST00000560371 PYGLP06737 847 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 OCM2P0CE71 109 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 OCMP0CE72 109 aaPredicted RBP14.12□□□□□ -0.15
TRAF3-208ENST00000560371 UGP2Q16851 508 aa14.12□□□□□ -0.15
TRAF3-208ENST00000560371 FOXP2O15409 715 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 GTF2H1P32780 548 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 ANKS3Q6ZW76 656 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 NR1H4Q96RI1 486 aaPredicted RBP14.11□□□□□ -0.15
TRAF3-208ENST00000560371 CFAP99D6REC4 459 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 H7C4K7 107 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 MKNK1Q9BUB5 465 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 ADAMTS13Q76LX8 1427 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 ESYT3A0FGR9 886 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 CYP11B2P19099 503 aa14.11□□□□□ -0.15
TRAF3-208ENST00000560371 PDK1Q15118 436 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms