RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ROR1Q01973 937 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 TPGS2Q68CL5 300 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 TCEAL8Q8IYN2 117 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 GRAMD1CQ8IYS0 662 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 GPD1LQ8N335 351 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 PLCD3Q8N3E9 789 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 EDAQ92838 391 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 FAM212AQ96EL1 285 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 SAAL1Q96ER3 474 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 KIAA1586Q9HCI6 787 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 DPP3Q9NY33 737 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 FBXL5Q9UKA1 691 aa14.31□□□□□ -0.12
SMAD3-213ENST00000560175 TSC2P49815 1807 aa14.3□□□□□ -0.12
SMAD3-213ENST00000560175 N4BP1O75113 896 aaKnown RBP14.3□□□□□ -0.12
SMAD3-213ENST00000560175 STK4Q13043 487 aa14.3□□□□□ -0.12
SMAD3-213ENST00000560175 ARMCX5Q6P1M9 558 aa14.3□□□□□ -0.12
SMAD3-213ENST00000560175 CCDC149Q6ZUS6 474 aa14.3□□□□□ -0.12
SMAD3-213ENST00000560175 SMG7Q92540 1137 aaKnown RBP14.3□□□□□ -0.12
SMAD3-213ENST00000560175 SENP8Q96LD8 212 aa14.3□□□□□ -0.12
SMAD3-213ENST00000560175 GOLPH3LQ9H4A5 285 aa14.3□□□□□ -0.12
SMAD3-213ENST00000560175 PCIF1Q9H4Z3 704 aa14.3□□□□□ -0.12
SMAD3-213ENST00000560175 SLC39A2Q9NP94 309 aa14.3□□□□□ -0.12
SMAD3-213ENST00000560175 AGPAT3Q9NRZ7 376 aa14.3□□□□□ -0.12
SMAD3-213ENST00000560175 RBAKQ9NYW8 714 aaPredicted RBP14.3□□□□□ -0.12
SMAD3-213ENST00000560175 HSPBP1Q9NZL4 362 aa14.3□□□□□ -0.12
SMAD3-213ENST00000560175 MUTYHQ9UIF7 546 aa14.3□□□□□ -0.12
SMAD3-213ENST00000560175 GOLGA8IPA6NC78 632 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 ZNF233A6NK53 670 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 GOLGA8JA6NMD2 632 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 ZNF202O95125 648 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 C8AP07357 584 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 ZXDAP98168 799 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 YWHAHQ04917 246 aaPredicted RBP14.29□□□□□ -0.12
SMAD3-213ENST00000560175 DPYDQ12882 1025 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 SURF1Q15526 300 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 KNOP1Q1ED39 458 aaKnown RBP14.29□□□□□ -0.12
SMAD3-213ENST00000560175 KMT5BQ4FZB7 885 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 CTXN3Q4LDR2 81 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 ZNF280DQ6N043 979 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 KRBA2Q6ZNG9 492 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 OTOP3Q7RTS5 596 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 C1orf127Q8N9H9 656 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 KIAA0895Q8NCT3 520 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 ENGASEQ8NFI3 743 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 CACTINQ8WUQ7 758 aaKnown RBP14.29□□□□□ -0.12
SMAD3-213ENST00000560175 LRFN3Q9BTN0 628 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 GDPD2Q9HCC8 539 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 PDE11AQ9HCR9 933 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 AVENQ9NQS1 362 aaPredicted RBP14.29□□□□□ -0.12
SMAD3-213ENST00000560175 DMAC2Q9NW81 257 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 AFF4Q9UHB7 1163 aaKnown RBP14.29□□□□□ -0.12
SMAD3-213ENST00000560175 CLUHO75153 1309 aa14.29□□□□□ -0.12
SMAD3-213ENST00000560175 PRR33A8MZF0 331 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 RHOBTB3O94955 611 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 SEC24AO95486 1093 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 VNN2O95498 520 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 TAF6P49848 677 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 SNW1Q13573 536 aaKnown RBP14.28□□□□□ -0.12
SMAD3-213ENST00000560175 MYBPC2Q14324 1141 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 PTPN21Q16825 1174 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 TMEM31Q5JXX7 168 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 PPM1LQ5SGD2 360 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 LIN9Q5TKA1 542 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 BMP8AQ7Z5Y6 402 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 CBWD2Q8IUF1 395 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 SLC9A9Q8IVB4 645 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 FMR1NBQ8N0W7 255 aaPredicted RBP14.28□□□□□ -0.12
SMAD3-213ENST00000560175 FSIP1Q8NA03 581 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 ACSF2Q96CM8 615 aaPredicted RBP14.28□□□□□ -0.12
SMAD3-213ENST00000560175 MFSD14AQ96MC6 490 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 KCTD10Q9H3F6 313 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 INTS13Q9NVM9 706 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.28□□□□□ -0.121e-8■□□□□ 10.9
SMAD3-213ENST00000560175 EPS15L1Q9UBC2 864 aa14.28□□□□□ -0.12
SMAD3-213ENST00000560175 OR6C75A6NL08 312 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 SPDYE4A6NLX3 237 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 KPNA7A9QM74 516 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 PNPLA4P41247 253 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 MCCD1P59942 119 aaPredicted RBP14.27□□□□□ -0.13
SMAD3-213ENST00000560175 GPR17Q13304 367 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 KCNB1Q14721 858 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 SCARA3Q6AZY7 606 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 OVOS1Q6IE37 1185 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 DSTYKQ6XUX3 929 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 HS2ST1Q7LGA3 356 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 LIMS2Q7Z4I7 341 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 LRRC52Q8N7C0 313 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 TDRD5Q8NAT2 981 aaKnown RBP14.27□□□□□ -0.13
SMAD3-213ENST00000560175 XXYLT1Q8NBI6 393 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 SLC7A14Q8TBB6 771 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 RTP3Q9BQQ7 232 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 GZF1Q9H116 711 aaPredicted RBP14.27□□□□□ -0.13
SMAD3-213ENST00000560175 GDAP2Q9NXN4 497 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 HSFX1Q9UBD0 423 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 LIMD1Q9UGP4 676 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 SIX4Q9UIU6 781 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 ITGA11Q9UKX5 1188 aa14.27□□□□□ -0.13
SMAD3-213ENST00000560175 CIZ1Q9ULV3 898 aaPredicted RBP14.27□□□□□ -0.13
SMAD3-213ENST00000560175 TIMM13Q9Y5L4 95 aaPredicted RBP14.27□□□□□ -0.13
SMAD3-213ENST00000560175 ZFP37Q9Y6Q3 630 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms