RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ENOX1Q8TC92 643 aaKnown RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 LINC01599Q8WXQ3 324 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 TRIM43Q96BQ3 446 aaPredicted RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 DHTKD1Q96HY7 919 aaPredicted RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 ABHD8Q96I13 439 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 CNOT6LQ96LI5 555 aaKnown RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 ACO2Q99798 780 aaKnown RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 FAM213AQ9BRX8 229 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 NTPCRQ9BSD7 190 aaKnown RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 APOL6Q9BWW8 343 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 SRRTQ9BXP5 876 aaKnown RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 MRPL4Q9BYD3 311 aaKnown RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 CELF4Q9BZC1 486 aaKnown RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 GCOM2Q9BZD3 368 aaPredicted RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 GBP3Q9H0R5 595 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 WNT8AQ9H1J5 351 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 CDT1Q9H211 546 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 FZD8Q9H461 694 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 ST6GALNAC4Q9H4F1 302 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 MMRN2Q9H8L6 949 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 GRPEL1Q9HAV7 217 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 PRDM5Q9NQX1 630 aaPredicted RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 TOPORSQ9NS56 1045 aaPredicted RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 TYW1Q9NV66 732 aaKnown RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 INTS13Q9NVM9 706 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 HSPBP1Q9NZL4 362 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 NAGPAQ9UK23 515 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 PIN4Q9Y237 131 aaKnown RBP5.69□□□□□ -1.5
SPG11-220ENST00000559933 HES2Q9Y543 173 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 UBE4BO95155 1302 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 PTPRJQ12913 1337 aa5.69□□□□□ -1.5
SPG11-220ENST00000559933 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 BICDL2A1A5D9 508 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 CCDC85CA6NKD9 419 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 MEIS3P2A8K0S8 358 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 KCNJ18B7U540 433 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 M0QZ92 97 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 ACKR2O00590 384 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 IKBKBO14920 756 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 CALUO43852 315 aaPredicted RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 FAM189A1O60320 539 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 NBNO60934 754 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 ERLIN2O94905 339 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 PIGRP01833 764 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 CXCL8P10145 99 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 ZNF18P17022 549 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 SYN1P17600 705 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 PROZP22891 400 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 GRNP28799 593 aaKnown RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 KLK7P49862 253 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 GUCY2FP51841 1108 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 CRYBB1P53674 252 aaPredicted RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 DLG4P78352 724 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 APBA1Q02410 837 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 PTPN11Q06124 597 aaPredicted RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 ADAM9Q13443 819 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 KCNJ12Q14500 433 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 KRT31Q15323 416 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 MAPK6Q16659 721 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 TPD52L1Q16890 204 aaPredicted RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 DCAF17Q5H9S7 520 aaPredicted RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 PERM1Q5SV97 790 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 UBXN11Q5T124 520 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 CRELD2Q6UXH1 353 aaPredicted RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 HFE2Q6ZVN8 426 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 LRRC8DQ7L1W4 858 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 APTXQ7Z2E3 356 aaKnown RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 TMCO2Q7Z6W1 182 aaPredicted RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 DEFB128Q7Z7B8 93 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 UBE2Q1Q7Z7E8 422 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 ZNF410Q86VK4 478 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 ZC3H3Q8IXZ2 948 aaKnown RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 EXOC8Q8IYI6 725 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 THNSL1Q8IYQ7 743 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 C7orf61Q8IZ16 206 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 DTWD1Q8N5C7 304 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 POMGNT1Q8WZA1 660 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 CLP1Q92989 425 aaKnown RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 LPPQ93052 612 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 HVCN1Q96D96 273 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 VWCEQ96DN2 955 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 NAP1L5Q96NT1 182 aaPredicted RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 POP1Q99575 1024 aaKnown RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 TSG101Q99816 390 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 BPIFA3Q9BQP9 254 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 MSTO1Q9BUK6 570 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 NOC4LQ9BVI4 516 aaKnown RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 NAT10Q9H0A0 1025 aaKnown RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 SMG9Q9H0W8 520 aaKnown RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 C2orf40Q9H1Z8 148 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 TMX1Q9H3N1 280 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 HIPK3Q9H422 1215 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 NXF3Q9H4D5 531 aaKnown RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 C17orf75Q9HAS0 396 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 ERVK-5Q9HDB9 667 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 AGPAT5Q9NUQ2 364 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 PRMT7Q9NVM4 692 aaPredicted RBP5.68□□□□□ -1.5
SPG11-220ENST00000559933 ST3GAL5Q9UNP4 418 aa5.68□□□□□ -1.5
SPG11-220ENST00000559933 TRAF3IP3Q9Y228 551 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms