RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 MTF1Q14872 753 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 CLLU1OSQ5K130 101 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 CCDC170Q8IYT3 715 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 UBR7Q8N806 425 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 BCO2Q9BYV7 579 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 NXF1Q9UBU9 619 aaKnown RBP13.07□□□□□ -0.32
HERC1-205ENST00000559886 CNTN6Q9UQ52 1028 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 PCDHB7Q9Y5E2 793 aa13.07□□□□□ -0.32
HERC1-205ENST00000559886 P4HA1P13674 534 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 CSF2RAP15509 400 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 PNPLA4P41247 253 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 TMEM199Q8N511 208 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 KIAA1524Q8TCG1 905 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 HAUS4Q9H6D7 363 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 POLIQ9UNA4 740 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 INPP5FQ9Y2H2 1132 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 FNDC1Q4ZHG4 1894 aaPredicted RBP13.06□□□□□ -0.32
HERC1-205ENST00000559886 POMCP01189 267 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 FGFR1P11362 822 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 CLCN1P35523 988 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 EIF4A3P38919 411 aaKnown RBP13.06□□□□□ -0.32
HERC1-205ENST00000559886 USP8P40818 1118 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 PTK2Q05397 1052 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 ASTE1Q2TB18 679 aaPredicted RBP13.06□□□□□ -0.32
HERC1-205ENST00000559886 TDRD12Q587J7 1177 aaKnown RBP13.06□□□□□ -0.32
HERC1-205ENST00000559886 CCDC42Q96M95 316 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 ZNF560Q96MR9 790 aa13.06□□□□□ -0.32
HERC1-205ENST00000559886 RNF216Q9NWF9 866 aaPredicted RBP13.06□□□□□ -0.32
HERC1-205ENST00000559886 EPN1Q9Y6I3 576 aaPredicted RBP13.06□□□□□ -0.32
HERC1-205ENST00000559886 CYP26A1O43174 497 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 RPL9P32969 192 aaKnown RBP13.05□□□□□ -0.32
HERC1-205ENST00000559886 NOMO2Q5JPE7 1267 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 RPUSD2Q8IZ73 545 aaKnown RBP13.05□□□□□ -0.32
HERC1-205ENST00000559886 CYP3A43Q9HB55 503 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 KANSL3Q9P2N6 904 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 ABHD14A-ACY1A0A1B0GW23 586 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 NDUFA10O95299 355 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 PFKMP08237 780 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 WEE2P0C1S8 567 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 KRT5P13647 590 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 CYLC1P35663 651 aaPredicted RBP13.05□□□□□ -0.32
HERC1-205ENST00000559886 TAF6P49848 677 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 LILRA4P59901 499 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 TNNC1P63316 161 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 TUSC3Q13454 348 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 SCARA5Q6ZMJ2 495 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 TOGARAM2Q6ZUX3 1019 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 ZNF571Q7Z3V5 609 aaPredicted RBP13.05□□□□□ -0.32
HERC1-205ENST00000559886 NPAS4Q8IUM7 802 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 URGCPQ8TCY9 931 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 FAM124BQ9H5Z6 455 aaPredicted RBP13.05□□□□□ -0.32
HERC1-205ENST00000559886 CISHQ9NSE2 258 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 LRFN2Q9ULH4 789 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 PCDHB4Q9Y5E5 795 aa13.05□□□□□ -0.32
HERC1-205ENST00000559886 KPNA7A9QM74 516 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 SPTLC1O15269 473 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 CLCNKBP51801 687 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 YWHAEP62258 255 aaKnown RBP13.04□□□□□ -0.32
HERC1-205ENST00000559886 UPP1Q16831 310 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 SV2CQ496J9 727 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 TMEM270Q6UE05 265 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 DDX27Q96GQ7 796 aaKnown RBP13.04□□□□□ -0.32
HERC1-205ENST00000559886 SYT11Q9BT88 431 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 SDCBP2Q9H190 292 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 SMYD3Q9H7B4 428 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 GDAP2Q9NXN4 497 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 PRKAG2Q9UGJ0 569 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 EIF3CLB5ME19 914 aaKnown RBP13.04□□□□□ -0.32
HERC1-205ENST00000559886 HOXA2O43364 376 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 ANXA13P27216 316 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 KIF11P52732 1056 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 ZNF132P52740 706 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 CDH8P55286 799 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 DSC1Q08554 894 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.04□□□□□ -0.323e-7■□□□□ 8.1
HERC1-205ENST00000559886 SLC47A2Q86VL8 602 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 EPS8L1Q8TE68 723 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 RSPH1Q8WYR4 309 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 UROC1Q96N76 676 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 CASD1Q96PB1 797 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 EIF3CQ99613 913 aaKnown RBP13.04□□□□□ -0.32
HERC1-205ENST00000559886 DEF6Q9H4E7 631 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 KCND1Q9NSA2 647 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 TBC1D13Q9NVG8 400 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 CACNG4Q9UBN1 327 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 SNX9Q9Y5X1 595 aa13.04□□□□□ -0.32
HERC1-205ENST00000559886 CASTOR2A6NHX0 329 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 PODXLO00592 558 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 AKR1B10O60218 316 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 LCA5LO95447 670 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 CD58P19256 250 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 RAP1GAPP47736 663 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 BPIFB4P59827 614 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 ABI1Q8IZP0 508 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 RBBP8NLQ8NC74 664 aaPredicted RBP13.03□□□□□ -0.32
HERC1-205ENST00000559886 OLIG1Q8TAK6 271 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 MMS19Q96T76 1030 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 PAAF1Q9BRP4 392 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 DESI2Q9BSY9 194 aa13.03□□□□□ -0.32
HERC1-205ENST00000559886 IL23AQ9NPF7 189 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms