RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 KLHL42Q9P2K6 505 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 ANKFY1Q9P2R3 1169 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 ABCF2Q9UG63 623 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 SLC16A6O15403 523 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 ZFPL1O95159 310 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 SPDEFO95238 335 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 ABHD16AO95870 558 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 SPATA31D3P0C874 917 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 MYBP10242 640 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 DDX6P26196 483 aaKnown RBP eCLIP4.28□□□□□ -1.72
CASC4-210ENST00000559550 SMARCA1P28370 1054 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 PRDX5P30044 214 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 PTGS2P35354 604 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 BMPR1AP36894 532 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 PHKA1P46020 1223 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 TP53BP2Q13625 1128 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 PPP2R5AQ15172 486 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 CCDC93Q567U6 631 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 SPATA31D4Q6ZUB0 917 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 ZNF365Q70YC5 407 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 CHPFQ8IZ52 775 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 SYNE4Q8N205 404 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 SH2D3CQ8N5H7 860 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 PLBD2Q8NHP8 589 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 PPP1R35Q8TAP8 253 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 SLC35G2Q8TBE7 412 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 PROKR1Q8TCW9 393 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 NUP133Q8WUM0 1156 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 NACC2Q96BF6 587 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 AIFM3Q96NN9 605 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 TAAR9Q96RI9 348 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 REXO4Q9GZR2 422 aaKnown RBP4.28□□□□□ -1.72
CASC4-210ENST00000559550 RNPEPQ9H4A4 650 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 POLHQ9Y253 713 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 NR2E3Q9Y5X4 410 aa4.28□□□□□ -1.72
CASC4-210ENST00000559550 E9PLN8 166 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 TSPAN6O43657 245 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 MATN4O95460 622 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 GPANK1O95872 356 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 AHSGP02765 367 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 GJB1P08034 283 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 TYRP14679 529 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 ITGB6P18564 788 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 CXADRP78310 365 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 NKX6-1P78426 367 aaPredicted RBP4.27□□□□□ -1.73
CASC4-210ENST00000559550 PLS1Q14651 629 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 COLEC12Q5KU26 742 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 FAM102BQ5T8I3 360 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 THEMIS2Q5TEJ8 643 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 KCNV1Q6PIU1 500 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.27□□□□□ -1.73
CASC4-210ENST00000559550 PPP1R3BQ86XI6 285 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 CELF5Q8N6W0 485 aaKnown RBP4.27□□□□□ -1.73
CASC4-210ENST00000559550 Q8NA96 180 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 TSR2Q969E8 191 aaKnown RBP4.27□□□□□ -1.73
CASC4-210ENST00000559550 RNF31Q96EP0 1072 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 C1GALT1C1Q96EU7 318 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 LRIG1Q96JA1 1093 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 CGRRF1Q99675 332 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 ACO2Q99798 780 aaKnown RBP4.27□□□□□ -1.73
CASC4-210ENST00000559550 VKORC1Q9BQB6 163 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 LRFN3Q9BTN0 628 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 TTPALQ9BTX7 342 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 ALOXE3Q9BYJ1 711 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 MRPL46Q9H2W6 279 aaKnown RBP4.27□□□□□ -1.73
CASC4-210ENST00000559550 SERHL2Q9H4I8 314 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 NMRK2Q9NPI5 230 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 SLAMF7Q9NQ25 335 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 KMT5AQ9NQR1 393 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 MAN1C1Q9NR34 630 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 LMBRD1Q9NUN5 540 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 MRPS18AQ9NVS2 196 aaKnown RBP4.27□□□□□ -1.73
CASC4-210ENST00000559550 SIDT1Q9NXL6 827 aaKnown RBP4.27□□□□□ -1.73
CASC4-210ENST00000559550 CDYLQ9Y232 598 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 PCDHA1Q9Y5I3 950 aa4.27□□□□□ -1.73
CASC4-210ENST00000559550 H3BUI4 141 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 HSPA6P17066 643 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 PROZP22891 400 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 PIK3CGP48736 1102 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 MRPS21P82921 87 aaKnown RBP4.26□□□□□ -1.73
CASC4-210ENST00000559550 SCAPQ12770 1279 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 GTF2H3Q13889 308 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 CYP2A13Q16696 494 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 LY6G5CQ5SRR4 150 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 COL23A1Q86Y22 540 aaPredicted RBP4.26□□□□□ -1.73
CASC4-210ENST00000559550 ARHGEF19Q8IW93 802 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 ZBTB34Q8NCN2 500 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 PDPRQ8NCN5 879 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 SLC17A8Q8NDX2 589 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 NSUN7Q8NE18 718 aaKnown RBP4.26□□□□□ -1.73
CASC4-210ENST00000559550 KLHDC4Q8TBB5 520 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 ASB10Q8WXI3 467 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 TNPO1Q92973 898 aaKnown RBP4.26□□□□□ -1.73
CASC4-210ENST00000559550 SLC35A4Q96G79 324 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 ZNF764Q96H86 408 aaPredicted RBP4.26□□□□□ -1.73
CASC4-210ENST00000559550 PNKPQ96T60 521 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 WDR11Q9BZH6 1224 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 IMPG2Q9BZV3 1241 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 BRD9Q9H8M2 597 aa4.26□□□□□ -1.73
CASC4-210ENST00000559550 PNPOQ9NVS9 261 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms