RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 M0QZ92 97 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 SASH3O75995 380 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 CPT1AP50416 773 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 TRADDQ15628 312 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 ACAD10Q6JQN1 1059 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 UBA3Q8TBC4 463 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 ZNF606Q8WXB4 792 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 HPDLQ96IR7 371 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 MAF1Q9H063 256 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 TNFSF13BQ9Y275 285 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 SLC45A1Q9Y2W3 748 aa11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 ZNFX1Q9P2E3 1918 aaKnown RBP11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 RBBP6Q7Z6E9 1792 aaKnown RBP11.52□□□□□ -0.57
CSPG4P5-201ENST00000558731 IGKV6-21A0A0C4DH24 114 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 RARBP10826 455 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 SURF1Q15526 300 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 DNAJC21Q5F1R6 531 aaKnown RBP11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 TSHZ1Q6ZSZ6 1077 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 HDXQ7Z353 690 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 CCDC113Q9H0I3 377 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 STIM2Q9P246 746 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 PI4K2BG5E9Z4 385 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 TLR3O15455 904 aaKnown RBP11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 RAD51CO43502 376 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 TSPAN1O60635 241 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 HOXC6P09630 235 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 ATF7P17544 494 aaPredicted RBP11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 HTRA3P83110 453 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 CASP8Q14790 479 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 CLEC16AQ2KHT3 1053 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 CDCA2Q69YH5 1023 aaPredicted RBP11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 OR6B3Q8NGW1 331 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 ALG3Q92685 438 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 CCDC114Q96M63 670 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 GOLGA2P5Q9HBQ8 144 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 CACNG4Q9UBN1 327 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 GRAP2O75791 330 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 PIGRP01833 764 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 PDGFRBP09619 1106 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 RGS7P49802 495 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 PRKCZQ05513 592 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 MFSD14CQ5VZR4 134 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 TAB3Q8N5C8 712 aaPredicted RBP11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 C1orf127Q8N9H9 656 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 USP38Q8NB14 1042 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 RIN2Q8WYP3 895 aaPredicted RBP11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 APBA2Q99767 749 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 CXCL16Q9H2A7 254 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 STYXL1Q9Y6J8 313 aa11.51□□□□□ -0.57
CSPG4P5-201ENST00000558731 ADGRA2Q96PE1 1338 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 C17orf102A2RUQ5 167 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 M0QYV0 167 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 ASS1P00966 412 aaKnown RBP11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 GLI1P08151 1106 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 ANXA13P27216 316 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 CARSP49589 748 aaKnown RBP11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 FCGRTP55899 365 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 TRIP13Q15645 432 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 DNAJC24Q6P3W2 148 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 ERICH1Q86X53 443 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 CCDC105Q8IYK2 499 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 LRRC57Q8N9N7 239 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 MAGOHBQ96A72 148 aaKnown RBP11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 RNF25Q96BH1 459 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 HAUS1Q96CS2 278 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 PBKQ96KB5 322 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 MCEEQ96PE7 176 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 TRIM51Q9BSJ1 452 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 KATNBL1Q9H079 304 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 DPP3Q9NY33 737 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 RRP15Q9Y3B9 282 aaKnown RBP11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 TTI1O43156 1089 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 SART1O43290 800 aaKnown RBP11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 ZC3H11AO75152 810 aaKnown RBP eCLIP11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 MCM3P25205 808 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 SLC10A6Q3KNW5 377 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 MORC4Q8TE76 937 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 C18orf25Q96B23 403 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 HMGXB4Q9UGU5 601 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 GTF3C4Q9UKN8 822 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 RRN3P2A6NIE6 340 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 AKR1A1P14550 325 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 KCNJ1P48048 391 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 CDO1Q16878 200 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 MARCH8Q5T0T0 291 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 CCDC25Q86WR0 208 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 LCMT1Q9UIC8 334 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 INTUQ9ULD6 942 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 INPP5FQ9Y2H2 1132 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 NR2E1Q9Y466 385 aa11.5□□□□□ -0.57
CSPG4P5-201ENST00000558731 LCTP09848 1927 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 PLCB3Q01970 1234 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 PAN2Q504Q3 1202 aaKnown RBP11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 MAATS1Q7Z4T9 603 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 ZNF467Q7Z7K2 595 aaPredicted RBP11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 IFT20Q8IY31 132 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 MCOLN2Q8IZK6 566 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 NRCAMQ92823 1304 aa11.49□□□□□ -0.57
CSPG4P5-201ENST00000558731 TULP2O00295 520 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms