RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 MKRN3Q13064 507 aaKnown RBP16.35■□□□□ 0.21
AP4E1-202ENST00000558439 ATP13A4Q4VNC1 1196 aa16.35■□□□□ 0.21
AP4E1-202ENST00000558439 PPM1NQ8N819 430 aa16.35■□□□□ 0.21
AP4E1-202ENST00000558439 ARL2BPQ9Y2Y0 163 aa16.35■□□□□ 0.21
AP4E1-202ENST00000558439 FOXO6A8MYZ6 492 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 DRP2Q13474 957 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 FAM71AQ8IYT1 594 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 MAML1Q92585 1016 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 SGSM3Q96HU1 749 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 ROPN1BQ9BZX4 212 aaPredicted RBP16.34■□□□□ 0.21
AP4E1-202ENST00000558439 ROPN1Q9HAT0 212 aaPredicted RBP16.34■□□□□ 0.21
AP4E1-202ENST00000558439 MYH14Q7Z406 1995 aaKnown RBP16.34■□□□□ 0.21
AP4E1-202ENST00000558439 SHOX2O60902 331 aaPredicted RBP16.34■□□□□ 0.21
AP4E1-202ENST00000558439 ZBED1O96006 694 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 SAT1P21673 171 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 ABCD1P33897 745 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 CDH6P55285 790 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 RCOR2Q8IZ40 523 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 TMEM161BQ8NDZ6 487 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 FAM49AQ9H0Q0 323 aaPredicted RBP16.34■□□□□ 0.21
AP4E1-202ENST00000558439 TXLNGQ9NUQ3 528 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 SLC8A3P57103 927 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 MUM1Q2TAK8 710 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 TMC2Q8TDI7 906 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 RNF34Q969K3 372 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 DCPSQ96C86 337 aaKnown RBP16.34■□□□□ 0.21
AP4E1-202ENST00000558439 OTUD5Q96G74 571 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 MBOAT7Q96N66 472 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 TMEM121Q9BTD3 319 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.34■□□□□ 0.21
AP4E1-202ENST00000558439 DOT1LQ8TEK3 1739 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 A6NJR5 290 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 NDC80O14777 642 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 PIAS1O75925 651 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 TTC4O95801 387 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 CCNYQ8ND76 341 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 MIS12Q9H081 205 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 C10orf88Q9H8K7 445 aa16.34■□□□□ 0.21
AP4E1-202ENST00000558439 NCANO14594 1321 aa16.33■□□□□ 0.21
AP4E1-202ENST00000558439 PPFIA2O75334 1257 aa16.33■□□□□ 0.21
AP4E1-202ENST00000558439 BAG2O95816 211 aa16.33■□□□□ 0.21
AP4E1-202ENST00000558439 ZSCAN5DPP0CG00 497 aa16.33■□□□□ 0.21
AP4E1-202ENST00000558439 PEX19P40855 299 aa16.33■□□□□ 0.21
AP4E1-202ENST00000558439 RGS7P49802 495 aa16.33■□□□□ 0.21
AP4E1-202ENST00000558439 GTF2BQ00403 316 aa16.33■□□□□ 0.21
AP4E1-202ENST00000558439 AGBL3Q8NEM8 1001 aa16.33■□□□□ 0.21
AP4E1-202ENST00000558439 SLC13A1Q9BZW2 595 aa16.33■□□□□ 0.21
AP4E1-202ENST00000558439 FAM47DPA6NHR8 397 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 ARHGAP42A6NI28 874 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 PROSCO94903 275 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 UBOX5O94941 541 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 CPP00450 1065 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 SNRPFP62306 86 aaKnown RBP16.33■□□□□ 0.2
AP4E1-202ENST00000558439 EAPPQ56P03 285 aaPredicted RBP16.33■□□□□ 0.2
AP4E1-202ENST00000558439 PPP1R2P3Q6NXS1 205 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 TRIM50Q86XT4 487 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 SLC9A9Q8IVB4 645 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 DAW1Q8N136 415 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 RASGEF1CQ8N431 466 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 SHC3Q92529 594 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 GPRASP2Q96D09 838 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 ERP27Q96DN0 273 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 SPATA33Q96N06 139 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 TPX2Q9ULW0 747 aaKnown RBP16.33■□□□□ 0.2
AP4E1-202ENST00000558439 ASTN2O75129 1339 aaPredicted RBP16.33■□□□□ 0.2
AP4E1-202ENST00000558439 CIB2O75838 187 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 FDX1P10109 184 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 BACE1P56817 501 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 MRPS9P82933 396 aaKnown RBP16.33■□□□□ 0.2
AP4E1-202ENST00000558439 ZNF572Q7Z3I7 529 aaPredicted RBP16.33■□□□□ 0.2
AP4E1-202ENST00000558439 CCDC60Q8IWA6 550 aaPredicted RBP16.33■□□□□ 0.2
AP4E1-202ENST00000558439 EMC1Q8N766 993 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 TTC25Q96NG3 672 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 SERPINB12Q96P63 405 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 NAALADL1Q9UQQ1 740 aa16.33■□□□□ 0.2
AP4E1-202ENST00000558439 MYH15Q9Y2K3 1946 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 IGF2BP3O00425 579 aaKnown RBP eCLIP16.32■□□□□ 0.2
AP4E1-202ENST00000558439 VWA5AO00534 786 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 KITP10721 976 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 EIF3EP60228 445 aaKnown RBP16.32■□□□□ 0.2
AP4E1-202ENST00000558439 MYL6P60660 151 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 TSNAXIP1Q2TAA8 658 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 C3orf62Q6ZUJ4 267 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 ANO5Q75V66 913 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 MAP4K3Q8IVH8 894 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 LMNTD2Q8IXW0 634 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 CFAP61Q8NHU2 1237 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 PRPF31Q8WWY3 499 aaKnown RBP16.32■□□□□ 0.2
AP4E1-202ENST00000558439 OATP04181 439 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 PDE1BQ01064 536 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 Q3C1V9 767 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 SYDE1Q6ZW31 735 aaPredicted RBP16.32■□□□□ 0.2
AP4E1-202ENST00000558439 CHMP2BQ9UQN3 213 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 CFAP69A5D8W1 941 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 MAFGO15525 162 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 KRT7P08729 469 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 GARTP22102 1010 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 SURF1Q15526 300 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 ANKRD20A8PQ5CZ79 823 aa16.32■□□□□ 0.2
AP4E1-202ENST00000558439 RFX8Q6ZV50 586 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms