RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 LBX2Q6XYB7 198 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 MON1BQ7L1V2 547 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 TAOK1Q7L7X3 1001 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 YTHDF3Q7Z739 585 aaKnown RBP7.74□□□□□ -1.17
VPS13C-206ENST00000558338 PHF13Q86YI8 300 aaPredicted RBP7.74□□□□□ -1.17
VPS13C-206ENST00000558338 WDR49Q8IV35 697 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 BRSK2Q8IWQ3 736 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 RHOT1Q8IXI2 618 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 C10orf67Q8IYJ2 551 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 OR2W6PQ8NHA6 318 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.74□□□□□ -1.17
VPS13C-206ENST00000558338 FBXO25Q8TCJ0 367 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 ASAP3Q8TDY4 903 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 ZNF473Q8WTR7 871 aaKnown RBP7.74□□□□□ -1.17
VPS13C-206ENST00000558338 GLG1Q92896 1179 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 ART4Q93070 314 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 ROPN1BQ9BZX4 212 aaPredicted RBP7.74□□□□□ -1.17
VPS13C-206ENST00000558338 C2orf40Q9H1Z8 148 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 ROPN1Q9HAT0 212 aaPredicted RBP7.74□□□□□ -1.17
VPS13C-206ENST00000558338 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.74□□□□□ -1.17
VPS13C-206ENST00000558338 GPRC5DQ9NZD1 345 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 NOVA2Q9UNW9 492 aaKnown RBP7.74□□□□□ -1.17
VPS13C-206ENST00000558338 PCDHB4Q9Y5E5 795 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 FAM169AQ9Y6X4 670 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 PTPRFP10586 1907 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 PAPPA2Q9BXP8 1791 aa7.74□□□□□ -1.17
VPS13C-206ENST00000558338 MROH7Q68CQ1 1323 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 ZNF541Q9H0D2 1346 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 DICER1Q9UPY3 1922 aaKnown RBP7.73□□□□□ -1.17
VPS13C-206ENST00000558338 GMNCA6NCL1 334 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 E7EVH7 732 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 RGS16O15492 202 aaPredicted RBP7.73□□□□□ -1.17
VPS13C-206ENST00000558338 THAP12O43422 761 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 ADCY3O60266 1144 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 ZBTB7AO95365 584 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 LSM8O95777 96 aaKnown RBP7.73□□□□□ -1.17
VPS13C-206ENST00000558338 CPP00450 1065 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 CALB1P05937 261 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 RARAP10276 462 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 ITIH2P19823 946 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 UBA1P22314 1058 aaKnown RBP7.73□□□□□ -1.17
VPS13C-206ENST00000558338 MAGOHP61326 146 aaKnown RBP7.73□□□□□ -1.17
VPS13C-206ENST00000558338 YWHAEP62258 255 aaKnown RBP7.73□□□□□ -1.17
VPS13C-206ENST00000558338 NOMO3P69849 1222 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 NOP14P78316 857 aaKnown RBP7.73□□□□□ -1.17
VPS13C-206ENST00000558338 LMNB2Q03252 620 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 TAP1Q03518 808 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 DRP2Q13474 957 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 PTK6Q13882 451 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 TARBP2Q15633 366 aaKnown RBP7.73□□□□□ -1.17
VPS13C-206ENST00000558338 IER5Q5VY09 327 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 TTC19Q6DKK2 380 aaPredicted RBP7.73□□□□□ -1.17
VPS13C-206ENST00000558338 AADACL2Q6P093 401 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 TTC27Q6P3X3 843 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 TADA2BQ86TJ2 420 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 ZBTB8OSQ8IWT0 167 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 ABRAQ8N0Z2 381 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 MYCBPAPQ8TBZ2 947 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 CCHCR1Q8TD31 782 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 ZNF516Q92618 1163 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 TMEM143Q96AN5 459 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 SNF8Q96H20 258 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 BTBD6Q96KE9 485 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 PI4K2AQ9BTU6 479 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 MRPL4Q9BYD3 311 aaKnown RBP7.73□□□□□ -1.17
VPS13C-206ENST00000558338 FOXP3Q9BZS1 431 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 AZI2Q9H6S1 392 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 PARVAQ9NVD7 372 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 CSADQ9Y600 493 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 ADGRA2Q96PE1 1338 aa7.73□□□□□ -1.17
VPS13C-206ENST00000558338 CLDN3O15551 220 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 TRAPPC3O43617 180 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 MAFO75444 373 aaPredicted RBP7.72□□□□□ -1.17
VPS13C-206ENST00000558338 FARP2O94887 1054 aaPredicted RBP7.72□□□□□ -1.17
VPS13C-206ENST00000558338 VNN1O95497 513 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 ATP4AP20648 1035 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 ACO1P21399 889 aaKnown RBP7.72□□□□□ -1.17
VPS13C-206ENST00000558338 RRM1P23921 792 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 ACOT2P49753 483 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 STAT5BP51692 787 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 KRT17Q04695 432 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 NCOA4Q13772 614 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 MXD4Q14582 209 aaPredicted RBP7.72□□□□□ -1.17
VPS13C-206ENST00000558338 CDCA2Q69YH5 1023 aaPredicted RBP7.72□□□□□ -1.17
VPS13C-206ENST00000558338 METTL7BQ6UX53 244 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 CRELD2Q6UXH1 353 aaPredicted RBP7.72□□□□□ -1.17
VPS13C-206ENST00000558338 SEPT14Q6ZU15 432 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 KATNAL2Q8IYT4 538 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 GPC2Q8N158 579 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 RBBP8NLQ8NC74 664 aaPredicted RBP7.72□□□□□ -1.17
VPS13C-206ENST00000558338 EXD1Q8NHP7 514 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 TRPM4Q8TD43 1214 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 SEPT1Q8WYJ6 367 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 P3H4Q92791 437 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 RBM41Q96IZ5 413 aaKnown RBP7.72□□□□□ -1.17
VPS13C-206ENST00000558338 CCT8L2Q96SF2 557 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 TARS2Q9BW92 718 aaKnown RBP7.72□□□□□ -1.17
VPS13C-206ENST00000558338 ACP6Q9NPH0 428 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 ADAM22Q9P0K1 906 aa7.72□□□□□ -1.17
VPS13C-206ENST00000558338 ANKFY1Q9P2R3 1169 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms