RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 LRRC4Q9HBW1 653 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 TIMMDC1Q9NPL8 285 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 STK39Q9UEW8 545 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 PLAGL2Q9UPG8 496 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 IPPQ9Y573 584 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 HEY1Q9Y5J3 304 aa12.32□□□□□ -0.44
CSPG4P12-201ENST00000558282 NEMP1O14524 444 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 RGS5O15539 181 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 GYS1P13807 737 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 DDX5P17844 614 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 LAMC2Q13753 1193 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 TRIM71Q2Q1W2 868 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 FIGNQ5HY92 759 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 ZNF618Q5T7W0 954 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 C3orf62Q6ZUJ4 267 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 TRIM74Q86UV6 250 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 TRIM73Q86UV7 250 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 FAR2Q96K12 515 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 EPAS1Q99814 870 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 ZNF446Q9NWS9 450 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 SMARCAL1Q9NZC9 954 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 ADAM30Q9UKF2 790 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 CARD8Q9Y2G2 431 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 HBS1LQ9Y450 684 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 H0YC42 278 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 EIF3DO15371 548 aaKnown RBP eCLIP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 ZSCAN9O15535 394 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 GCP02774 474 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 KCNA2P16389 499 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 SPRP35270 261 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 STK4Q13043 487 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 AP3B2Q13367 1082 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 TAB1Q15750 504 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 CCDC81Q6ZN84 652 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 CD302Q8IX05 232 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 LRRC47Q8N1G4 583 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 PGM2Q96G03 612 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 CIDEBQ9UHD4 219 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 GINS2Q9Y248 185 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 INPP5FQ9Y2H2 1132 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 SNX13Q9Y5W8 968 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 MYO1DO94832 1006 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 RIPK1Q13546 671 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 CCDC153Q494R4 210 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 PPP6R3Q5H9R7 873 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 DPP8Q6V1X1 898 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 TAS2R42Q7RTR8 314 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 CAPSLQ8WWF8 208 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 ARHGEF26Q96DR7 871 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 CELF4Q9BZC1 486 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 GPBP1L1Q9HC44 474 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 CYLDQ9NQC7 956 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 PCMTD2Q9NV79 361 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 DMGDHQ9UI17 866 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 SLC24A2Q9UI40 661 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 ADGRL3Q9HAR2 1447 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 TRPM1Q7Z4N2 1603 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 CLDN3O15551 220 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 PSMG1O95456 288 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 CCDC130P13994 396 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 CDH3P22223 829 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 CIITAP33076 1130 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 VAMP7P51809 220 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 RAB15P59190 212 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 EIF3EP60228 445 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 FAM47CQ5HY64 1035 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 ARMCX2Q7L311 632 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 NUP93Q8N1F7 819 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 DDX17Q92841 729 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 TATDN2Q93075 761 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 ZNF496Q96IT1 587 aaPredicted RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 PIGSQ96S52 555 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 FAM32AQ9Y421 112 aaKnown RBP12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 AATKQ6ZMQ8 1374 aa12.31□□□□□ -0.44
CSPG4P12-201ENST00000558282 TCN1P20061 433 aaPredicted RBP12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 SARSP49591 514 aaKnown RBP12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 NPEPPSP55786 919 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 C4orf50Q6ZRC1 276 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 SGMS1Q86VZ5 419 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 SVOPQ8N4V2 548 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 C19orf18Q8NEA5 215 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 EPS8L3Q8TE67 593 aaKnown RBP12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 FNIP1Q8TF40 1166 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 KCNB2Q92953 911 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 TSPAN17Q96FV3 270 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 VPS50Q96JG6 964 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 GJB4Q9NTQ9 266 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 GALNT8Q9NY28 637 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 CPSF3Q9UKF6 684 aaKnown RBP12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 SLC26A4O43511 780 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 JAK1P23458 1154 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 TFAMQ00059 246 aaKnown RBP12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 MIGA2Q7L4E1 593 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 TMC4Q7Z404 712 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 LCORLQ8N3X6 602 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 IL17REQ8NFR9 667 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 BEST2Q8NFU1 509 aa12.3□□□□□ -0.44
CSPG4P12-201ENST00000558282 AGR3Q8TD06 166 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms