RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 RAB17Q9H0T7 212 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 CHST7Q9NS84 486 aa11.25□□□□□ -0.61
TPM1-210ENST00000558264 CCL15-CCL14A0A0B4J2E2 113 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 SMIM23A6NLE4 172 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 PI4K2BG5E9Z4 385 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 TBXAS1P24557 533 aaPredicted RBP11.24□□□□□ -0.61
TPM1-210ENST00000558264 CTNNA2P26232 953 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 VPS41P49754 854 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 GNGT1P63211 74 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 TMEM62Q0P6H9 643 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 MAMLD1Q13495 774 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 CCL15Q16663 113 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 ZFYVE27Q5T4F4 411 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 LDLRAD1Q5T700 205 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 TAPT1Q6NXT6 567 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 KCNV1Q6PIU1 500 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 ANKS1BQ7Z6G8 1248 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 TFAP2BQ92481 460 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 L3MBTL3Q96JM7 780 aaPredicted RBP11.24□□□□□ -0.61
TPM1-210ENST00000558264 SCLT1Q96NL6 688 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 FAM114A2Q9NRY5 505 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 RNF19AQ9NV58 838 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 ERAP1Q9NZ08 941 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 TJP2Q9UDY2 1190 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 R3HDM2Q9Y2K5 976 aaKnown RBP11.24□□□□□ -0.61
TPM1-210ENST00000558264 DNAH12Q6ZR08 3092 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 ACKR2O00590 384 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 TLR3O15455 904 aaKnown RBP11.24□□□□□ -0.61
TPM1-210ENST00000558264 HBP1O60381 514 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 CHRNA3P32297 505 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 COILP38432 576 aaPredicted RBP11.24□□□□□ -0.61
TPM1-210ENST00000558264 ZNF844Q08AG5 666 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 GPR162Q16538 588 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 SGO2Q562F6 1265 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 ZDHHC24Q6UX98 284 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 DPH6Q7L8W6 267 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 PRUNE1Q86TP1 453 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 ZNF677Q86XU0 584 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 ZC3H15Q8WU90 426 aaKnown RBP11.24□□□□□ -0.61
TPM1-210ENST00000558264 NIF3L1Q9GZT8 377 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 IFT122Q9HBG6 1241 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 ZDHHC18Q9NUE0 388 aa11.24□□□□□ -0.61
TPM1-210ENST00000558264 DNAJC17Q9NVM6 304 aaKnown RBP11.24□□□□□ -0.61
TPM1-210ENST00000558264 ASB14A6NK59 587 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 H0YGN5 161 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 MEFVO15553 781 aaPredicted RBP11.23□□□□□ -0.61
TPM1-210ENST00000558264 ZEB2O60315 1214 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 SHBGP04278 402 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 CD19P15391 556 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 IRX5P78411 483 aaPredicted RBP11.23□□□□□ -0.61
TPM1-210ENST00000558264 ENPEPQ07075 957 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 TFDP1Q14186 410 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 LIN9Q5TKA1 542 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 MAMDC4Q6UXC1 1216 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 TSHZ1Q6ZSZ6 1077 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 CCDC25Q86WR0 208 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 BRI3BPQ8WY22 251 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 SEC14L1Q92503 715 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 RNF25Q96BH1 459 aaPredicted RBP11.23□□□□□ -0.61
TPM1-210ENST00000558264 LRRC45Q96CN5 670 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 MCEEQ96PE7 176 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 CAPS2Q9BXY5 557 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 FZD8Q9H461 694 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 PTPRHQ9HD43 1115 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 GRHL1Q9NZI5 618 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 HMGXB4Q9UGU5 601 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 MTUS1Q9ULD2 1270 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 NFS1Q9Y697 457 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 GLTPD2A6NH11 291 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 DCDC2CA8MYV0 355 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 ANKRD65E5RJM6 399 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 RALAP11233 206 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 ASPAP45381 313 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 GUCY1A3Q02108 690 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 PTP4A2Q12974 167 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 DHX34Q14147 1143 aaKnown RBP11.23□□□□□ -0.61
TPM1-210ENST00000558264 PPP1R7Q15435 360 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 WDR72Q3MJ13 1102 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 KAZNQ674X7 775 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 FAM81BQ96LP2 452 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 XYLT2Q9H1B5 865 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 C2orf40Q9H1Z8 148 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 AVENQ9NQS1 362 aaPredicted RBP11.23□□□□□ -0.61
TPM1-210ENST00000558264 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.23□□□□□ -0.61
TPM1-210ENST00000558264 RASAL2Q9UJF2 1139 aa11.23□□□□□ -0.61
TPM1-210ENST00000558264 GOLGA8SH3BPF8 625 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 PROSCO94903 275 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 TNNC2P02585 160 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 ITGB3P05106 788 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 PROZP22891 400 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 IRAK1P51617 712 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 ZNF792Q3KQV3 632 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 JADE1Q6IE81 842 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 DPP9Q86TI2 863 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 MORC4Q8TE76 937 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 NLRP7Q8WX94 980 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 LENG1Q96BZ8 264 aaPredicted RBP11.22□□□□□ -0.61
TPM1-210ENST00000558264 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
TPM1-210ENST00000558264 MS4A4AQ96JQ5 239 aa11.22□□□□□ -0.61
TPM1-210ENST00000558264 CCDC114Q96M63 670 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms