RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 SLC10A6Q3KNW5 377 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 ZCWPW2Q504Y3 356 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 NOMO2Q5JPE7 1267 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 WDR44Q5JSH3 913 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 SPOUT1Q5T280 376 aaKnown RBP13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 C11orf57Q6ZUT1 292 aaPredicted RBP13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 CREBRFQ8IUR6 639 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 C12orf56Q8IXR9 622 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 URGCPQ8TCY9 931 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 CASD1Q96PB1 797 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 RAD9AQ99638 391 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 TMEM117Q9H0C3 514 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 DNAJC25Q9H1X3 360 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 TOPORSQ9NS56 1045 aaPredicted RBP13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 RBAKQ9NYW8 714 aaPredicted RBP13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 FRMD4BQ9Y2L6 1034 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 INSL6Q9Y581 213 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 USP3Q9Y6I4 520 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 LCHNA4D1U4 455 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 SLC35F4A4IF30 521 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 CARNS1A5YM72 827 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 CDK2AP1O14519 115 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 CETN3O15182 167 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 ADRB2P07550 413 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 FKBP3Q00688 224 aaKnown RBP13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 LRRC63Q05C16 580 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 PPP2R3AQ06190 1150 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 SNRNP35Q16560 246 aaKnown RBP13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 EDRF1Q3B7T1 1238 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 ANO6Q4KMQ2 910 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 TTI2Q6NXR4 508 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 ZNF689Q96CS4 500 aaPredicted RBP13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 SNX27Q96L92 541 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 FAM193BQ96PV7 902 aaPredicted RBP13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 DUSP9Q99956 384 aaKnown RBP13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 SRRTQ9BXP5 876 aaKnown RBP13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 KIAA1586Q9HCI6 787 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 DMAC2Q9NW81 257 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 SCHIP1Q9P0W5 487 aaPredicted RBP13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 RWDD2AQ9UIY3 292 aa13.03□□□□□ -0.32
HMGB1P8-201ENST00000558211 ANK1P16157 1881 aa13.02□□□□□ -0.32
HMGB1P8-201ENST00000558211 SMIM28A0A1B0GU29 152 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 MEFVO15553 781 aaPredicted RBP13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 THP07101 528 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 RHOQP17081 205 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 HTRA4P83105 476 aaPredicted RBP13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 NFIL3Q16649 462 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 LRRC55Q6ZSA7 311 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 SLC9A9Q8IVB4 645 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 BRSK2Q8IWQ3 736 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 FIBCD1Q8N539 461 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 CSGALNACT2Q8N6G5 542 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 CCDC127Q96BQ5 260 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 ZMAT2Q96NC0 199 aaKnown RBP13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 MED15Q96RN5 788 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 PBX4Q9BYU1 374 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 NKX2-4Q9H2Z4 354 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 PDE11AQ9HCR9 933 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 TBC1D13Q9NVG8 400 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 MSRAQ9UJ68 235 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 ZMIZ1Q9ULJ6 1067 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 PLAGL2Q9UPG8 496 aa13.02□□□□□ -0.33
HMGB1P8-201ENST00000558211 TTC26A0AVF1 554 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 PTGESO14684 152 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 AKAP3O75969 853 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 DDHD2O94830 711 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 CA3P07451 260 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 DLATP10515 647 aaKnown RBP13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 EPB41P11171 864 aaKnown RBP13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 ERCC5P28715 1186 aaPredicted RBP13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 PSMC2P35998 433 aaKnown RBP13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 CYP24A1Q07973 514 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 MYBPC2Q14324 1141 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 CCDC40Q4G0X9 1142 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 HSP90AA4PQ58FG1 418 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 LMBRD2Q68DH5 695 aaPredicted RBP13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 JADE1Q6IE81 842 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 ALKAL1Q6UXT8 129 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 ZNF280BQ86YH2 543 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 FAM186BQ8IYM0 893 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 CMTR2Q8IYT2 770 aaKnown RBP13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 TMEM130Q8N3G9 435 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 TSEN2Q8NCE0 465 aaKnown RBP13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 GSTCDQ8NEC7 633 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 RHBDD1Q8TEB9 315 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 RABGGTAQ92696 567 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 FAM84AQ96KN4 292 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 FBXL18Q96ME1 805 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 FNBP1Q96RU3 617 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 FUCA2Q9BTY2 467 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 MRPL9Q9BYD2 267 aaKnown RBP13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 PLEKHA5Q9HAU0 1116 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 KANSL3Q9P2N6 904 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 CACNG4Q9UBN1 327 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 NXF1Q9UBU9 619 aaKnown RBP13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 NOVA2Q9UNW9 492 aaKnown RBP13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 YBX2Q9Y2T7 364 aaKnown RBP13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 PCDHA11Q9Y5I1 949 aa13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 MRPL42Q9Y6G3 142 aaKnown RBP13.01□□□□□ -0.33
HMGB1P8-201ENST00000558211 PDCD11Q14690 1871 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms