RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 NPHP3-ACAD11A0A0J9YXS1 232 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 CCDC195A0A1B0GUA6 201 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 KIAA0391O15091 583 aaKnown RBP12.41□□□□□ -0.42
LINC00648-204ENST00000557749 TGM5O43548 720 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 ZXDAP98168 799 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 GRIN1Q05586 938 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 SIGLEC14Q08ET2 396 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 RTP2Q5QGT7 225 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 TAS1R1Q7RTX1 841 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 BMP8AQ7Z5Y6 402 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 NT5DC4Q86YG4 428 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 CEP120Q8N960 986 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 IQUBQ8NA54 791 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 KREMEN2Q8NCW0 462 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 BEST2Q8NFU1 509 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 LNX1Q8TBB1 728 aaPredicted RBP12.41□□□□□ -0.42
LINC00648-204ENST00000557749 HASPINQ8TF76 798 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 SMG7Q92540 1137 aaKnown RBP12.41□□□□□ -0.42
LINC00648-204ENST00000557749 ASB7Q9H672 318 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 TMEM206Q9H813 350 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 MRPL44Q9H9J2 332 aaKnown RBP12.41□□□□□ -0.42
LINC00648-204ENST00000557749 WDR6Q9NNW5 1121 aaKnown RBP12.41□□□□□ -0.42
LINC00648-204ENST00000557749 FAM13BQ9NYF5 915 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC00648-204ENST00000557749 IGSF9Q9P2J2 1179 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 MTRRQ9UBK8 725 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 FKBPLQ9UIM3 349 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 FBXW11Q9UKB1 542 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 USP20Q9Y2K6 914 aa12.41□□□□□ -0.42
LINC00648-204ENST00000557749 A0A0B4J269 797 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 TTC26A0AVF1 554 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 LDHAP00338 332 aaKnown RBP12.4□□□□□ -0.42
LINC00648-204ENST00000557749 F13A1P00488 732 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 ELF1P32519 619 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 MCM4P33991 863 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 WNT7BP56706 349 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 RAB33AQ14088 237 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 PPM1LQ5SGD2 360 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 ADALQ6DHV7 355 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 ZNF280DQ6N043 979 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 LILRA6Q6PI73 481 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 ZNF720Q7Z2F6 126 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 PALB2Q86YC2 1186 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 SUGP1Q8IWZ8 645 aaKnown RBP12.4□□□□□ -0.42
LINC00648-204ENST00000557749 C12orf76Q8N812 135 aaPredicted RBP12.4□□□□□ -0.42
LINC00648-204ENST00000557749 FOXJ1Q92949 421 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 CLIC6Q96NY7 704 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 ACCSQ96QU6 501 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 PAAF1Q9BRP4 392 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 C2CD2Q9Y426 696 aa12.4□□□□□ -0.42
LINC00648-204ENST00000557749 CLUHO75153 1309 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 F8W810 466 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 IL18RAPO95256 599 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 CXCL8P10145 99 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 IDEP14735 1019 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 LRPAP1P30533 357 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 SLC10A6Q3KNW5 377 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 SPECC1Q5M775 1068 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 TPGS2Q68CL5 300 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 SLC8B1Q6J4K2 584 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 FAM173BQ6P4H8 233 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 DYMQ7RTS9 669 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 SYCP3Q8IZU3 236 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 ZBTB45Q96K62 511 aaPredicted RBP12.39□□□□□ -0.43
LINC00648-204ENST00000557749 SUSD3Q96L08 255 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 B3GALT6Q96L58 329 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 CLSTN3Q9BQT9 956 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 AGO2Q9UKV8 859 aaKnown RBP12.39□□□□□ -0.43
LINC00648-204ENST00000557749 STYXL1Q9Y6J8 313 aa12.39□□□□□ -0.43
LINC00648-204ENST00000557749 MTCL1Q9Y4B5 1905 aaKnown RBP12.39□□□□□ -0.43
LINC00648-204ENST00000557749 FRMD3A2A2Y4 597 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 TMEM221A6NGB7 291 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 C2CD4DB7Z1M9 353 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 M0R296 226 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 GCNT3O95395 438 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 C8AP07357 584 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 ADRB2P07550 413 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 OR1D2P34982 312 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 ME1P48163 572 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 BECN1Q14457 450 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 L1TD1Q5T7N2 865 aaKnown RBP12.38□□□□□ -0.43
LINC00648-204ENST00000557749 PRSS55Q6UWB4 352 aaPredicted RBP12.38□□□□□ -0.43
LINC00648-204ENST00000557749 USP49Q70CQ1 688 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 USP37Q86T82 979 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 SFR1Q86XK3 245 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 ZNF461Q8TAF7 563 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 POMGNT1Q8WZA1 660 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 RABGGTAQ92696 567 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 ZMAT2Q96NC0 199 aaKnown RBP12.38□□□□□ -0.43
LINC00648-204ENST00000557749 FIZ1Q96SL8 496 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 IRF2BPLQ9H1B7 796 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 C11orf16Q9NQ32 467 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 PANK4Q9NVE7 773 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 CPSF3Q9UKF6 684 aaKnown RBP12.38□□□□□ -0.43
LINC00648-204ENST00000557749 DSEQ9UL01 958 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 CDY1Q9Y6F8 540 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 MYH15Q9Y2K3 1946 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 DENND4AQ7Z401 1863 aa12.38□□□□□ -0.43
LINC00648-204ENST00000557749 FAM86C2PA6NEL3 165 aa12.37□□□□□ -0.43
LINC00648-204ENST00000557749 MYMKA6NI61 221 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms