RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 P3H1Q32P28 736 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 LACTB2Q53H82 288 aaPredicted RBP18.81■□□□□ 0.6
XRCC3-218ENST00000557439 NUGGCQ68CJ6 796 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 ZNF365Q70YC5 407 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 RDM1Q8NG50 284 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 JDP2Q8WYK2 163 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 CAMKK2Q96RR4 588 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 C10orf88Q9H8K7 445 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 TNS1Q9HBL0 1735 aaKnown RBP18.81■□□□□ 0.6
XRCC3-218ENST00000557439 SUPT20HL2P0C7V6 817 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 PTP4A2Q12974 167 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 MTM1Q13496 603 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 FASTKD3Q14CZ7 662 aaKnown RBP18.81■□□□□ 0.6
XRCC3-218ENST00000557439 PLCB4Q15147 1175 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 SUPT20HL1Q3ZLR7 823 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 TAB3Q8N5C8 712 aaPredicted RBP18.81■□□□□ 0.6
XRCC3-218ENST00000557439 ANKS4BQ8N8V4 417 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 ZNF280CQ8ND82 737 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 DEPTORQ8TB45 409 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 THOC1Q96FV9 657 aaKnown RBP18.81■□□□□ 0.6
XRCC3-218ENST00000557439 TRAIPQ9BWF2 469 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 KDM4CQ9H3R0 1056 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 DNPEPQ9ULA0 475 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.81■□□□□ 0.6
XRCC3-218ENST00000557439 ZC3H11AO75152 810 aaKnown RBP eCLIP18.8■□□□□ 0.6
XRCC3-218ENST00000557439 PIAS1O75925 651 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 PTPRAP18433 802 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 HIBCHQ6NVY1 386 aaPredicted RBP18.8■□□□□ 0.6
XRCC3-218ENST00000557439 DLK2Q6UY11 383 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 RHOT1Q8IXI2 618 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 ROPN1BQ9BZX4 212 aaPredicted RBP18.8■□□□□ 0.6
XRCC3-218ENST00000557439 ROPN1Q9HAT0 212 aaPredicted RBP18.8■□□□□ 0.6
XRCC3-218ENST00000557439 PPP1R1BQ9UD71 204 aaPredicted RBP18.8■□□□□ 0.6
XRCC3-218ENST00000557439 TPX2Q9ULW0 747 aaKnown RBP18.8■□□□□ 0.6
XRCC3-218ENST00000557439 NAALADL1Q9UQQ1 740 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 RLFQ13129 1914 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 GSTTP1A0A1W2PQM5 241 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 F8VP50 259 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 CLTAP09496 248 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 SLC1A1P43005 524 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 GMPSP49915 693 aaPredicted RBP18.8■□□□□ 0.6
XRCC3-218ENST00000557439 CLDN10P78369 228 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 ZNF252P-AS1Q0IIN9 211 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 TNFAIP1Q13829 316 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 XKR3Q5GH77 459 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 LIN9Q5TKA1 542 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 MFSD7Q6UXD7 560 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 SERPINB12Q96P63 405 aa18.8■□□□□ 0.6
XRCC3-218ENST00000557439 SNX3O60493 162 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 BANF1O75531 89 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 UBOX5O94941 541 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 BRD2P25440 801 aaKnown RBP18.79■□□□□ 0.6
XRCC3-218ENST00000557439 OGDHQ02218 1023 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 TMEM63BQ5T3F8 832 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 MIS18BP1Q6P0N0 1132 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 SCARA5Q6ZMJ2 495 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 EEPD1Q7L9B9 569 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 TRPM8Q7Z2W7 1104 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 TBC1D1Q86TI0 1168 aaPredicted RBP18.79■□□□□ 0.6
XRCC3-218ENST00000557439 PARP9Q8IXQ6 854 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 STMN4Q9H169 189 aaPredicted RBP18.79■□□□□ 0.6
XRCC3-218ENST00000557439 ZNF302Q9NR11 478 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 HOMER3Q9NSC5 361 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 SAE1Q9UBE0 346 aaPredicted RBP18.79■□□□□ 0.6
XRCC3-218ENST00000557439 RGPD3A6NKT7 1758 aaPredicted RBP18.79■□□□□ 0.6
XRCC3-218ENST00000557439 RGPD4Q7Z3J3 1758 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 SPATA31C2B4DYI2 1134 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 NCOA4Q13772 614 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 TMED2Q15363 201 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 CDR2LQ86X02 465 aaPredicted RBP18.79■□□□□ 0.6
XRCC3-218ENST00000557439 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.79■□□□□ 0.6
XRCC3-218ENST00000557439 GRK7Q8WTQ7 553 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 ZNF606Q8WXB4 792 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 MCEEQ96PE7 176 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 KIF9Q9HAQ2 790 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 IVNS1ABPQ9Y6Y0 642 aa18.79■□□□□ 0.6
XRCC3-218ENST00000557439 CNTNAP2Q9UHC6 1331 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 SPAG7O75391 227 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 MYBL1P10243 752 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 E2F5Q15329 346 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 CYP4A22Q5TCH4 519 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 CEP57Q86XR8 500 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 ZNF677Q86XU0 584 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 SCYL3Q8IZE3 742 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 TCP11Q8WWU5 503 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 SGSM3Q96HU1 749 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 RBM15Q96T37 977 aaKnown RBP eCLIP18.78■□□□□ 0.6
XRCC3-218ENST00000557439 PAIP2Q9BPZ3 127 aaKnown RBP18.78■□□□□ 0.6
XRCC3-218ENST00000557439 PORCNQ9H237 461 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 CCDC134Q9H6E4 229 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 OATP04181 439 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 BPIFB4P59827 614 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 NFX1Q12986 1120 aaKnown RBP18.78■□□□□ 0.6
XRCC3-218ENST00000557439 CCNG2Q16589 344 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 PLEKHA7Q6IQ23 1121 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 FAM81BQ96LP2 452 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 MTMR12Q9C0I1 747 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 PICK1Q9NRD5 415 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 TJP2Q9UDY2 1190 aa18.78■□□□□ 0.6
XRCC3-218ENST00000557439 ITGBL1O95965 494 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms