RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 NUP205Q92621 2012 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 MYBPHLA2RUH7 354 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 TMEM8BA6NDV4 472 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 M0R2N6 131 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 ARNTLO00327 626 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 CHADO15335 359 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 MOSPD3O75425 235 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 MICAL2O94851 1124 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 ABLIM3O94929 683 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 SLITRK3O94933 977 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 ATP2B1P20020 1258 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 RPS6KB1P23443 525 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 PDIA3P30101 505 aaKnown RBP8.85□□□□□ -0.99
PCNX1-215ENST00000557428 GBP1P32455 592 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 MCM4P33991 863 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 RAP1GAPP47736 663 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 RARRES1P49788 294 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 YARSP54577 528 aaKnown RBP8.85□□□□□ -0.99
PCNX1-215ENST00000557428 TNK2Q07912 1038 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 ELF2Q15723 593 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 STXBP5Q5T5C0 1151 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 SLC8B1Q6J4K2 584 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 ZNF280DQ6N043 979 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 RALGPS2Q86X27 583 aaPredicted RBP8.85□□□□□ -0.99
PCNX1-215ENST00000557428 SLFN12Q8IYM2 578 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 TCEAL8Q8IYN2 117 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 KDF1Q8NAX2 398 aaPredicted RBP8.85□□□□□ -0.99
PCNX1-215ENST00000557428 E2F7Q96AV8 911 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 PGLYRP2Q96PD5 576 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 PPP1R10Q96QC0 940 aaKnown RBP8.85□□□□□ -0.99
PCNX1-215ENST00000557428 NAP1L4Q99733 375 aaKnown RBP8.85□□□□□ -0.99
PCNX1-215ENST00000557428 LARP6Q9BRS8 491 aaKnown RBP8.85□□□□□ -0.99
PCNX1-215ENST00000557428 KIFC3Q9BVG8 833 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 SCNM1Q9BWG6 230 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 C2orf40Q9H1Z8 148 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 ANKEF1Q9NU02 776 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 POLR3BQ9NW08 1133 aaPredicted RBP8.85□□□□□ -0.99
PCNX1-215ENST00000557428 FBXL5Q9UKA1 691 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 YIPF1Q9Y548 306 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 PCDHGA5Q9Y5G8 931 aa8.85□□□□□ -0.99
PCNX1-215ENST00000557428 THADAQ6YHU6 1953 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 WDFY3Q8IZQ1 3526 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 FASNP49327 2511 aaKnown RBP8.84□□□□□ -0.99
PCNX1-215ENST00000557428 DCLK1O15075 740 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 DTNBO60941 627 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 CAVIN2O95810 425 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 EDN1P05305 212 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 HARSP12081 509 aaKnown RBP8.84□□□□□ -0.99
PCNX1-215ENST00000557428 TIE1P35590 1138 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 SOX4Q06945 474 aaPredicted RBP8.84□□□□□ -0.99
PCNX1-215ENST00000557428 NPY5RQ15761 445 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 TSGA10IPQ3SY00 556 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 PLA2G2CQ5R387 149 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 GPR158Q5T848 1215 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 TPGS2Q68CL5 300 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 CDCA2Q69YH5 1023 aaPredicted RBP8.84□□□□□ -0.99
PCNX1-215ENST00000557428 GALNT17Q6IS24 598 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 CPLX2Q6PUV4 134 aaKnown RBP8.84□□□□□ -0.99
PCNX1-215ENST00000557428 LRSAM1Q6UWE0 723 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 CD300LGQ6UXG3 332 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 RNF19BQ6ZMZ0 732 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 APBB1IPQ7Z5R6 666 aaPredicted RBP8.84□□□□□ -0.99
PCNX1-215ENST00000557428 LEMD2Q8NC56 503 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 MCPH1Q8NEM0 835 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 DEFB124Q8NES8 71 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 BSNDQ8WZ55 320 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 ATXN3LQ9H3M9 355 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 FZD8Q9H461 694 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 TRPV4Q9HBA0 871 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 INVSQ9Y283 1065 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 SNX14Q9Y5W7 946 aa8.84□□□□□ -0.99
PCNX1-215ENST00000557428 DSPP15924 2871 aaKnown RBP8.84□□□□□ -0.99
PCNX1-215ENST00000557428 SMIM28A0A1B0GU29 152 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 FAM205CA6NFA0 338 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 SYN3O14994 580 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 RHOBTB1O94844 696 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 SEC24BO95487 1268 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 OR4Q2P0C623 313 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 MARCKSP29966 332 aaPredicted RBP8.83□□□□□ -1
PCNX1-215ENST00000557428 TXKP42681 527 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 EPHB3P54753 998 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 FCHO2Q0JRZ9 810 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 GRSF1Q12849 480 aaKnown RBP eCLIP8.83□□□□□ -1
PCNX1-215ENST00000557428 PLD1Q13393 1074 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 CCINQ13939 588 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 CALCRLQ16602 461 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 FAM187BQ17R55 369 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 PLK5Q496M5 336 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 ARHGAP29Q52LW3 1261 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 ARHGAP15Q53QZ3 475 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 ATF7IP2Q5U623 682 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 SKAP1Q86WV1 359 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 ARID3BQ8IVW6 561 aaPredicted RBP8.83□□□□□ -1
PCNX1-215ENST00000557428 CEP120Q8N960 986 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 TTC16Q8NEE8 873 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 OXER1Q8TDS5 423 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 GATA6Q92908 595 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 TMEM209Q96SK2 561 aa8.83□□□□□ -1
PCNX1-215ENST00000557428 CCDC94Q9BW85 323 aaPredicted RBP8.83□□□□□ -1
PCNX1-215ENST00000557428 GPR88Q9GZN0 384 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms