RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 SMIM10L2BP0DMW5 78 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 ARP10275 920 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 RPL10P27635 214 aaKnown RBP5.48□□□□□ -1.53
SCFD1-223ENST00000557076 GBP2P32456 591 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-223ENST00000557076 SLC16A2P36021 539 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 MTHFRP42898 656 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 PCBP3P57721 371 aaKnown RBP5.48□□□□□ -1.53
SCFD1-223ENST00000557076 SRSF3P84103 164 aaKnown RBP5.48□□□□□ -1.53
SCFD1-223ENST00000557076 SLC14A2Q15849 920 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 HSDL1Q3SXM5 330 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 ATAT1Q5SQI0 421 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 SYDE2Q5VT97 1194 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 RASGRP2Q7LDG7 609 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 REC114Q7Z4M0 266 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 ZNF655Q8N720 491 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-223ENST00000557076 CHMP4CQ96CF2 233 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 SPATA33Q96N06 139 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 TAAR1Q96RJ0 339 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 RMDN3Q96TC7 470 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 KIF2CQ99661 725 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 RSRP1Q9BUV0 290 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 FTHL17Q9BXU8 183 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 BOLA2Q9H3K6 86 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 SMOC2Q9H3U7 446 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 IL1RAPL2Q9NP60 686 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 CYP26B1Q9NR63 512 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 SIRT5Q9NXA8 310 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 WNT16Q9UBV4 365 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 PUF60Q9UHX1 559 aaKnown RBP5.48□□□□□ -1.53
SCFD1-223ENST00000557076 MBD1Q9UIS9 605 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-223ENST00000557076 STX8Q9UNK0 236 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 LZTS1Q9Y250 596 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 POLR3KQ9Y2Y1 108 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-223ENST00000557076 IRAK3Q9Y616 596 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 MRVI1Q9Y6F6 885 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 R4GN57 208 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 CACNA1IQ9P0X4 2223 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 TTC3P53804 2025 aa5.48□□□□□ -1.53
SCFD1-223ENST00000557076 FRYQ5TBA9 3013 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 SSU72P8A0A1W2PR75 194 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 NOTOA8MTQ0 251 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 FOXD2O60548 495 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-223ENST00000557076 FGF18O76093 207 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 CHGBP05060 677 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 ASGR2P07307 311 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 SP9P0CG40 484 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 SP100P23497 879 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-223ENST00000557076 GALK1P51570 392 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 TDGQ13569 410 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 LPIN1Q14693 890 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 SSPNQ14714 243 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 SNAP47Q5SQN1 464 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 TAF2Q6P1X5 1199 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 RUFY4Q6ZNE9 571 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 MCF2L2Q86YR7 1114 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 C1orf210Q8IVY1 113 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 SIRT2Q8IXJ6 389 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 IFNL3Q8IZI9 196 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 TBC1D5Q92609 795 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 CASP10Q92851 521 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 OSBP2Q969R2 916 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 KIF1BPQ96EK5 621 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.47□□□□□ -1.53
SCFD1-223ENST00000557076 POMKQ9H5K3 350 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 ERVK-5Q9HDB9 667 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 SETD4Q9NVD3 440 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 TMEM260Q9NX78 707 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 RTEL1Q9NZ71 1219 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 RALYQ9UKM9 306 aaKnown RBP5.47□□□□□ -1.53
SCFD1-223ENST00000557076 TCFL5Q9UL49 500 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 EXOC6BQ9Y2D4 811 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 SQORQ9Y6N5 450 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 SETXQ7Z333 2677 aaKnown RBP5.47□□□□□ -1.53
SCFD1-223ENST00000557076 NRCAMQ92823 1304 aa5.47□□□□□ -1.53
SCFD1-223ENST00000557076 TANC1Q9C0D5 1861 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 ABLIM1O14639 778 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 N4BP3O15049 544 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 TRIM13O60858 407 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 KINO60870 393 aaKnown RBP5.46□□□□□ -1.54
SCFD1-223ENST00000557076 APPP05067 770 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 LGALS2P05162 132 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 RPLP2P05387 115 aaKnown RBP5.46□□□□□ -1.54
SCFD1-223ENST00000557076 HSPD1P10809 573 aaKnown RBP5.46□□□□□ -1.54
SCFD1-223ENST00000557076 GHRP10912 638 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 PNLIPP16233 465 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 PI3P19957 117 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 ENDOUP21128 410 aaKnown RBP5.46□□□□□ -1.54
SCFD1-223ENST00000557076 TGM1P22735 817 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 TDO2P48775 406 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 SP2Q02086 613 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 MGAT3Q09327 533 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 RAD51AP2Q09MP3 1159 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 CCDC96Q2M329 555 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 ZNF528Q3MIS6 628 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 FBXO47Q5MNV8 452 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 ARHGEF16Q5VV41 709 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 CEP85Q6P2H3 762 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 TSHZ1Q6ZSZ6 1077 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 CEP128Q6ZU80 1094 aa5.46□□□□□ -1.54
SCFD1-223ENST00000557076 STOX1Q6ZVD7 989 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms