RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 CPB2Q96IY4 423 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 RPS6KC1Q96S38 1066 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 CDC42EP4Q9H3Q1 356 aaKnown RBP16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 NGRNQ9NPE2 291 aaKnown RBP16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 PCDHA3Q9Y5H8 950 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 A0A087WUV0 522 aaPredicted RBP16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 A6NNZ2 444 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 ARSEP51690 589 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 EIF3BP55884 814 aaKnown RBP16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 TUBB8Q3ZCM7 444 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 DUPD1Q68J44 220 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 OR6B2Q6IFH4 312 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 EFCAB13Q8IY85 973 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 RASGEF1CQ8N431 466 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 GRK7Q8WTQ7 553 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 LRRN4Q8WUT4 740 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 APOBEC3GQ9HC16 384 aaKnown RBP16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 PDGFCQ9NRA1 345 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 CISHQ9NSE2 258 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 TMEM59LQ9UK28 342 aa16.27■□□□□ 0.19
TMEM55B-207ENST00000557041 RPTORQ8N122 1335 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 AMHR2Q16671 573 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 BBS9Q3SYG4 887 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 C11orf63Q6NUN7 778 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 DPP9Q86TI2 863 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 MSL3Q8N5Y2 521 aaKnown RBP16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 MTMR14Q8NCE2 650 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 MMP19Q99542 508 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 C17orf75Q9HAS0 396 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 EXOC1LA0A1B0GW35 172 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 ATP2A1O14983 1001 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 LYPLA2O95372 231 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 BRAFP15056 766 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 CHKAP35790 457 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 LAMTOR4Q0VGL1 99 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 ZACNQ401N2 412 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 TMEM63BQ5T3F8 832 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 C6orf118Q5T5N4 469 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 ENOSF1Q7L5Y1 443 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 MTFR1LQ9H019 292 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 EFCC1Q9HA90 598 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 HOMER3Q9NSC5 361 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 GPRC5DQ9NZD1 345 aa16.26■□□□□ 0.19
TMEM55B-207ENST00000557041 SPATA31C2B4DYI2 1134 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 CLTAP09496 248 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 NAMPTP43490 491 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 CORO7P57737 925 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 KCTD6Q8NC69 237 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 TRIM11Q96F44 468 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 PORCNQ9H237 461 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 PARVAQ9NVD7 372 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 KCNG1Q9UIX4 513 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 IKBKGQ9Y6K9 419 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 THSD7AQ9UPZ6 1657 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 GOLGA8RI6L899 631 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 TCF4P15884 667 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 PPP6R3Q5H9R7 873 aaPredicted RBP16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 CTAGE3PQ8IX95 158 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 ZDHHC14Q8IZN3 488 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 ATL2Q8NHH9 583 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 RUNDC3BQ96NL0 473 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 TMEM121Q9BTD3 319 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 STK38LQ9Y2H1 464 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 HEY1Q9Y5J3 304 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 CES2O00748 559 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 RNF8O76064 485 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 ITGB3P05106 788 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 NFIL3Q16649 462 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 GLRA4Q5JXX5 417 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 LRIG3Q6UXM1 1119 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 TAS1R3Q7RTX0 852 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 ZBED8Q8IZ13 594 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 SAMD3Q8N6K7 520 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 RDM1Q8NG50 284 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 MAIP1Q8WWC4 291 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 SNF8Q96H20 258 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 MFSD14AQ96MC6 490 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 RBM15Q96T37 977 aaKnown RBP eCLIP16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 MIS12Q9H081 205 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 ASCC2Q9H1I8 757 aaPredicted RBP16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 MAP3K20Q9NYL2 800 aaKnown RBP16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 BAIAP2L1Q9UHR4 511 aa16.25■□□□□ 0.19
TMEM55B-207ENST00000557041 M0QYV0 167 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 TNFRSF8P28908 595 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 QPCTQ16769 361 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 ATF7IP2Q5U623 682 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 ABRAQ8N0Z2 381 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 FEZF2Q8TBJ5 459 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 TCP11Q8WWU5 503 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 KLF6Q99612 283 aaPredicted RBP16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 ALG13Q9NP73 1137 aaKnown RBP16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 AFG3L2Q9Y4W6 797 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 RASA4BC9J798 803 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 H7C0C1 242 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 RASA4O43374 803 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 KRT3P12035 628 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 CREB1P16220 341 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 ECHS1P30084 290 aa16.24■□□□□ 0.19
TMEM55B-207ENST00000557041 ATP5OP48047 213 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms