RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 CCL16O15467 120 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 TBC1D4O60343 1298 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 CLUHO75153 1309 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 LDHAP00338 332 aaKnown RBP11.22□□□□□ -0.61
SNX6-208ENST00000556712 ITGB3P05106 788 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 POLR2BP30876 1174 aaKnown RBP11.22□□□□□ -0.61
SNX6-208ENST00000556712 CDR1P51861 262 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 LILRA4P59901 499 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 NTHL1P78549 312 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 DPYDQ12882 1025 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 MRPL58Q14197 206 aaKnown RBP11.22□□□□□ -0.61
SNX6-208ENST00000556712 PPM1LQ5SGD2 360 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 ELMSAN1Q6PJG2 1045 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 C15orf39Q6ZRI6 1047 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 CCDC149Q6ZUS6 474 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 C1orf127Q8N9H9 656 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 RDH13Q8NBN7 331 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 APPL2Q8NEU8 664 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 DOCK8Q8NF50 2099 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 CMASQ8NFW8 434 aaPredicted RBP11.22□□□□□ -0.61
SNX6-208ENST00000556712 HDAC7Q8WUI4 952 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 SENP8Q96LD8 212 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 TSPAN18Q96SJ8 248 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 NOTCH4Q99466 2003 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 PLEKHA4Q9H4M7 779 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 PIDD1Q9HB75 910 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 C11orf16Q9NQ32 467 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 DPP7Q9UHL4 492 aa11.22□□□□□ -0.61
SNX6-208ENST00000556712 PI4K2BG5E9Z4 385 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 H7C4K7 107 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 DCXO43602 365 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 N4BP1O75113 896 aaKnown RBP11.21□□□□□ -0.61
SNX6-208ENST00000556712 TMEM191BP0C7N4 346 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 ODC1P11926 461 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 CPB1P15086 417 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 TAF6P49848 677 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 YWHAHQ04917 246 aaPredicted RBP11.21□□□□□ -0.61
SNX6-208ENST00000556712 SNRNP35Q16560 246 aaKnown RBP11.21□□□□□ -0.61
SNX6-208ENST00000556712 KNOP1Q1ED39 458 aaKnown RBP11.21□□□□□ -0.61
SNX6-208ENST00000556712 SLC8B1Q6J4K2 584 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 GET4Q7L5D6 327 aaPredicted RBP11.21□□□□□ -0.61
SNX6-208ENST00000556712 GRASPQ7Z6J2 395 aaPredicted RBP11.21□□□□□ -0.61
SNX6-208ENST00000556712 FMR1NBQ8N0W7 255 aaPredicted RBP11.21□□□□□ -0.61
SNX6-208ENST00000556712 OR5B17Q8NGF7 314 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 ERCC4Q92889 916 aaPredicted RBP11.21□□□□□ -0.61
SNX6-208ENST00000556712 TMEM209Q96SK2 561 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 PRKD2Q9BZL6 878 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 SMOC2Q9H3U7 446 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 HCFC1R1Q9NWW0 138 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 ZDHHC7Q9NXF8 308 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 POLIQ9UNA4 740 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 NR2E1Q9Y466 385 aa11.21□□□□□ -0.61
SNX6-208ENST00000556712 GOLGA6L4A6NEF3 574 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 ZNF233A6NK53 670 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 KIAA0391O15091 583 aaKnown RBP11.2□□□□□ -0.62
SNX6-208ENST00000556712 ABLIM3O94929 683 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 SEC24AO95486 1093 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 VNN2O95498 520 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 C1RP00736 705 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 MYL1P05976 194 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 ASGR2P07307 311 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 KRT19P08727 400 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 GBP2P32456 591 aaPredicted RBP11.2□□□□□ -0.62
SNX6-208ENST00000556712 POU5F1Q01860 360 aaKnown RBP11.2□□□□□ -0.62
SNX6-208ENST00000556712 BFSP1Q12934 665 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 PNOCQ13519 176 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 OVOS1Q6IE37 1185 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 RNF19BQ6ZMZ0 732 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 HS2ST1Q7LGA3 356 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 USP37Q86T82 979 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 NT5DC4Q86YG4 428 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 SMYD4Q8IYR2 804 aaPredicted RBP11.2□□□□□ -0.62
SNX6-208ENST00000556712 ST13P5Q8NFI4 369 aaPredicted RBP11.2□□□□□ -0.62
SNX6-208ENST00000556712 OR10T2Q8NGX3 314 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 CXorf38Q8TB03 319 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 ZNF560Q96MR9 790 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 PGLYRP2Q96PD5 576 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 KCTD10Q9H3F6 313 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 CYP4F11Q9HBI6 524 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 WDR6Q9NNW5 1121 aaKnown RBP11.2□□□□□ -0.62
SNX6-208ENST00000556712 SIX4Q9UIU6 781 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 AGAP1Q9UPQ3 857 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 MAPK8IP1Q9UQF2 711 aa11.2□□□□□ -0.62
SNX6-208ENST00000556712 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.2□□□□□ -0.62
SNX6-208ENST00000556712 CYB561D2O14569 222 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 PRRG1O14668 218 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 GADD45BO75293 160 aaPredicted RBP11.19□□□□□ -0.62
SNX6-208ENST00000556712 RHOBTB3O94955 611 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 OAZ2O95190 189 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 PAPLNO95428 1278 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 DLATP10515 647 aaKnown RBP11.19□□□□□ -0.62
SNX6-208ENST00000556712 TYMPP19971 482 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 HOXA9P31269 272 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 CASP4P49662 377 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 CYP24A1Q07973 514 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 ADCY1Q08828 1119 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 PSMD2Q13200 908 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 SNW1Q13573 536 aaKnown RBP11.19□□□□□ -0.62
SNX6-208ENST00000556712 PTPN21Q16825 1174 aa11.19□□□□□ -0.62
SNX6-208ENST00000556712 SV2CQ496J9 727 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms