RNA–Protein interactions for RNA: ENST00000556631.1

KTN1-224, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 5,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-224ENST00000556631 CCT4P50991 539 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 ZNF132P52740 706 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 SEC24CP53992 1094 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 RWDD2BP57060 319 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 KLHL30Q0D2K2 578 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 FUT2Q10981 343 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 SF3A3Q12874 501 aaKnown RBP eCLIP1.94□□□□□ -2.1
KTN1-224ENST00000556631 TDGQ13569 410 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 RIN1Q13671 783 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 IL18Q14116 193 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 SPIDRQ14159 915 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 EFTUD2Q15029 972 aaKnown RBP eCLIP1.94□□□□□ -2.1
KTN1-224ENST00000556631 IQCB1Q15051 598 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 EXOC3L4Q17RC7 722 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 KRT71Q3SY84 523 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TBRG1Q3YBR2 411 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 AASDHQ4L235 1098 aaPredicted RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 USP39Q53GS9 565 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 AKAP4Q5JQC9 854 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 RC3H1Q5TC82 1133 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 CDCA2Q69YH5 1023 aaPredicted RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 TMC5Q6UXY8 1006 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 SCARA5Q6ZMJ2 495 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 MACC1Q6ZN28 852 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 MFSD6Q6ZSS7 791 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TMTC3Q6ZXV5 915 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 FKBP9P1Q75LS8 142 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TAOK1Q7L7X3 1001 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 DPP9Q86TI2 863 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 MRPL50Q8N5N7 158 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 HDAC10Q969S8 669 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 MCUR1Q96AQ8 359 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 LINGO1Q96FE5 620 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 THOC1Q96FV9 657 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 FGD4Q96M96 766 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 MPHOSPH9Q99550 1183 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 RSRP1Q9BUV0 290 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TRIM4Q9C037 500 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 FGFR1OP2Q9NVK5 253 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 KLK14Q9P0G3 267 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 KLHL14Q9P2G3 628 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 CCPG1Q9ULG6 757 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 PCDHB14Q9Y5E9 798 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 FAM169AQ9Y6X4 670 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 ROBO2Q9HCK4 1378 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 DNAJC25-GNG10A0A024R161 153 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 NPIPA5A0A0B4J1W7 369 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TRAV34A0A0B4J273 112 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TEX13CA0A0J9YWL9 993 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 FAM95CA0A1B0GW59 222 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 A0A1W2PRG0 241 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 FAM221BA6H8Z2 402 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 CCDC154A6NI56 674 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 C16orf96A6NNT2 1141 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 FAM47E-STBD1D6RA91 191 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 KRIT1O00522 736 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 PRRG1O14668 218 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 PRAMEF4O60810 478 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 ZC3H11AO75152 810 aaKnown RBP eCLIP1.94□□□□□ -2.14e-6■□□□□ 9.1
KTN1-224ENST00000556631 TMCC1O94876 653 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 EGFRP00533 1210 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 VPREB1P12018 145 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 PPM1AP35813 382 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 SKIV2L2P42285 1042 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 RAP1GAPP47736 663 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 ATP5OP48047 213 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 MECP2P51608 486 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 GSDMDP57764 484 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 POU4F1Q01851 419 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.94□□□□□ -2.1
KTN1-224ENST00000556631 CUL2Q13617 745 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 RAB32Q13637 225 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 GIT2Q14161 759 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 EIF4A2Q14240 407 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 NFE2L1Q14494 772 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 SEC23AQ15436 765 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 NTRK2Q16620 822 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 AMZ1Q400G9 498 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 USH1GQ495M9 461 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 FNDC3BQ53EP0 1204 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 FAM83HQ6ZRV2 1179 aaPredicted RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 RIPOR1Q6ZS17 1223 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 RBM43Q6ZSC3 357 aaKnown RBP1.94□□□□□ -2.1
KTN1-224ENST00000556631 C16orf62Q7Z3J2 963 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 POLNQ7Z5Q5 900 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 SLC9B2Q86UD5 537 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 TGIF2LXQ8IUE1 241 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 BBS7Q8IWZ6 715 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 CCDC116Q8IYX3 515 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 FRMD1Q8N878 549 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 XXYLT1Q8NBI6 393 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 CALML6Q8TD86 181 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 PPP4R1Q8TF05 950 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 ASZ1Q8WWH4 475 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 SEPT1Q8WYJ6 367 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 RFT1Q96AA3 541 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 VPS33AQ96AX1 596 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 ASIC4Q96FT7 647 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 MTMR9Q96QG7 549 aa1.94□□□□□ -2.1
KTN1-224ENST00000556631 CCDC28BQ9BUN5 200 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms