RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 MYO5AQ9Y4I1 1855 aaKnown RBP6.66□□□□□ -1.34
CPSF2-205ENST00000556622 SSC5DA1L4H1 1573 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 A0A087X0B3 334 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 BTNL10A8MVZ5 291 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 CXCL11O14625 94 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 SCAMP3O14828 347 aaKnown RBP6.65□□□□□ -1.34
CPSF2-205ENST00000556622 CETN3O15182 167 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 PJA2O43164 708 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 CALUO43852 315 aaPredicted RBP6.65□□□□□ -1.34
CPSF2-205ENST00000556622 HSF2BPO75031 334 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 BPNT1O95861 308 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 PLCG1P19174 1290 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 GBP1P32455 592 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 ZNF76P36508 570 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 TECP42680 631 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 MAGEA1P43355 309 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 TNNT3P45378 269 aaPredicted RBP6.65□□□□□ -1.34
CPSF2-205ENST00000556622 EPHB4P54760 987 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 TNNC1P63316 161 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 CETN1Q12798 172 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 CCDC40Q4G0X9 1142 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 SNAP47Q5SQN1 464 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 SFMBT2Q5VUG0 894 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 PRAMEF13Q5VWM6 474 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 B4GALNT4Q76KP1 1039 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 SLITRK4Q8IW52 837 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 LRRC56Q8IYG6 542 aaPredicted RBP6.65□□□□□ -1.34
CPSF2-205ENST00000556622 SCYL3Q8IZE3 742 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 PLD6Q8N2A8 252 aaKnown RBP6.65□□□□□ -1.34
CPSF2-205ENST00000556622 C1orf131Q8NDD1 294 aaKnown RBP6.65□□□□□ -1.34
CPSF2-205ENST00000556622 TBCKQ8TEA7 893 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 AFAP1L1Q8TED9 768 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 COG1Q8WTW3 980 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 RAD54LQ92698 747 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 FAM20AQ96MK3 541 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 TOX2Q96NM4 488 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 PTPN18Q99952 460 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 TANGO6Q9C0B7 1094 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 ANKZF1Q9H8Y5 726 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 KCND2Q9NZV8 630 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 KIAA1522Q9P206 1035 aaPredicted RBP6.65□□□□□ -1.34
CPSF2-205ENST00000556622 VPS18Q9P253 973 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 HERC5Q9UII4 1024 aaKnown RBP6.65□□□□□ -1.34
CPSF2-205ENST00000556622 ZHX1Q9UKY1 873 aaPredicted RBP6.65□□□□□ -1.34
CPSF2-205ENST00000556622 INTUQ9ULD6 942 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 SNX12Q9UMY4 172 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 PCDHA13Q9Y5I0 950 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 COL4A3BPQ9Y5P4 624 aa6.65□□□□□ -1.34
CPSF2-205ENST00000556622 FLT1P17948 1338 aa6.65□□□□□ -1.35
CPSF2-205ENST00000556622 GOLGA6BA6NDN3 693 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 SRRM3A6NNA2 597 aaPredicted RBP6.64□□□□□ -1.35
CPSF2-205ENST00000556622 B4DLN1 442 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 RBAK-RBAKDNI3L0D1 243 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 ZBTB5O15062 677 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 KLRC4O43908 158 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 FKTNO75072 461 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 FLOT1O75955 427 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 KRT18P05783 430 aaKnown RBP6.64□□□□□ -1.35
CPSF2-205ENST00000556622 CEACAM5P06731 702 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 GAP43P17677 238 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 ARHGAP25P42331 645 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 RAP1GAPP47736 663 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 LMAN1P49257 510 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 NAP1L1P55209 391 aaKnown RBP6.64□□□□□ -1.35
CPSF2-205ENST00000556622 AMPD2Q01433 879 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 PRKCQQ04759 706 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 PAK2Q13177 524 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 DNAJC21Q5F1R6 531 aaKnown RBP6.64□□□□□ -1.35
CPSF2-205ENST00000556622 EARS2Q5JPH6 523 aaKnown RBP6.64□□□□□ -1.35
CPSF2-205ENST00000556622 NOL9Q5SY16 702 aaKnown RBP6.64□□□□□ -1.35
CPSF2-205ENST00000556622 HYIQ5T013 277 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 CFAP58Q5T655 872 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 ANKRD40Q6AI12 368 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 LETMD1Q6P1Q0 360 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 CCNI2Q6ZMN8 369 aaPredicted RBP6.64□□□□□ -1.35
CPSF2-205ENST00000556622 GADL1Q6ZQY3 521 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 FASTKD5Q7L8L6 764 aaKnown RBP6.64□□□□□ -1.35
CPSF2-205ENST00000556622 FRMD5Q7Z6J6 570 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 FAM76AQ8TAV0 307 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 RIN3Q8TB24 985 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 PPP1R13LQ8WUF5 828 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 DCAF4Q8WV16 495 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 BRI3BPQ8WY22 251 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 PBKQ96KB5 322 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 MTMR9Q96QG7 549 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 MED15Q96RN5 788 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 R3HDMLQ9H3Y0 253 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 SH2D4AQ9H788 454 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 MMRN2Q9H8L6 949 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 PSTPIP2Q9H939 334 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 KANSL2Q9H9L4 492 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 IL17RBQ9NRM6 502 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 MTMR4Q9NYA4 1195 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 DDX25Q9UHL0 483 aaKnown RBP6.64□□□□□ -1.35
CPSF2-205ENST00000556622 SERPINB13Q9UIV8 391 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 FBXL5Q9UKA1 691 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 DNM3Q9UQ16 869 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 GDAQ9Y2T3 454 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 AFG3L2Q9Y4W6 797 aa6.64□□□□□ -1.35
CPSF2-205ENST00000556622 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms