RNA–Protein interactions for RNA: ENST00000556587.5

SRSF5-215, Transcript of serine and arginine rich splicing factor 5, human

TSL 1 (best)

Gene SRSF5, Length 1,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF5-215	ENST00000556587	ACTR2	P61160	394 aa		13.6	□□□□□ -0.23
SRSF5-215	ENST00000556587	CDR2	Q01850	454 aa		13.6	□□□□□ -0.23
SRSF5-215	ENST00000556587	PWP2	Q15269	919 aa	Known RBP	13.6	□□□□□ -0.23
SRSF5-215	ENST00000556587	WDR44	Q5JSH3	913 aa		13.6	□□□□□ -0.23
SRSF5-215	ENST00000556587	ABHD15	Q6UXT9	468 aa		13.6	□□□□□ -0.23
SRSF5-215	ENST00000556587	CBWD2	Q8IUF1	395 aa		13.6	□□□□□ -0.23
SRSF5-215	ENST00000556587	RIN2	Q8WYP3	895 aa	Predicted RBP	13.6	□□□□□ -0.23
SRSF5-215	ENST00000556587	HINFP	Q9BQA5	517 aa		13.6	□□□□□ -0.23
SRSF5-215	ENST00000556587	AP5M1	Q9H0R1	490 aa		13.6	□□□□□ -0.23
SRSF5-215	ENST00000556587	TRPV6	Q9H1D0	765 aa		13.6	□□□□□ -0.23
SRSF5-215	ENST00000556587	GOLPH3	Q9H4A6	298 aa		13.6	□□□□□ -0.23
SRSF5-215	ENST00000556587	IL23A	Q9NPF7	189 aa		13.6	□□□□□ -0.23
SRSF5-215	ENST00000556587	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.6	□□□□□ -0.23
SRSF5-215	ENST00000556587	NOCT	Q9UK39	431 aa	Known RBP	13.6	□□□□□ -0.23
SRSF5-215	ENST00000556587	RBM47	A0AV96	593 aa	Known RBP	13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	ESYT3	A0FGR9	886 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	ANKRD63	C9JTQ0	380 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	CYP1A2	P05177	515 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	ADRB2	P07550	413 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	SUPT20HL2	P0C7V6	817 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	GUCY2F	P51841	1108 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	EIF3B	P55884	814 aa	Known RBP	13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	MRPS25	P82663	173 aa	Known RBP	13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	PRKCE	Q02156	737 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	BIRC3	Q13489	604 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	PRPF4B	Q13523	1007 aa	Known RBP	13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	CROCCP2	Q86T23	111 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	EXOC8	Q8IYI6	725 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	MAIP1	Q8WWC4	291 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	HERVK_113	Q902F9	699 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	CCDC127	Q96BQ5	260 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	ARHGEF26	Q96DR7	871 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	MPHOSPH6	Q99547	160 aa	Known RBP	13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	SEZ6L	Q9BYH1	1024 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	DDX47	Q9H0S4	455 aa	Known RBP	13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	C1orf112	Q9NSG2	853 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	ARHGAP28	Q9P2N2	729 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	SCN5A	Q14524	2016 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	GOLGA8IP	A6NC78	632 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	GOLGA8J	A6NMD2	632 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	TISP43	B9A030	160 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	MYZAP	P0CAP1	466 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	CYP11B1	P15538	503 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	EDNRB	P24530	442 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	LIG4	P49917	911 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	POLG	P54098	1239 aa	Predicted RBP	13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	DR1	Q01658	176 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	HELQ	Q8TDG4	1101 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	SLC20A1	Q8WUM9	679 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	FNBP1	Q96RU3	617 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	ZSWIM1	Q9BR11	485 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	TAS2R14	Q9NYV8	317 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	AMACR	Q9UHK6	382 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	TANC1	Q9C0D5	1861 aa		13.59	□□□□□ -0.23
SRSF5-215	ENST00000556587	SRRM3	A6NNA2	597 aa	Predicted RBP	13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	CYP26A1	O43174	497 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	ZNF862	O60290	1169 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	ZEB2	O60315	1214 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	STBD1	O95210	358 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	FAM153B	P0C7A2	387 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	CTNNA2	P26232	953 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	RFC5	P40937	340 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	NAMPT	P43490	491 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	CDR1	P51861	262 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	CLDN10	P78369	228 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	PURA	Q00577	322 aa	Known RBP	13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	FAM153C	Q494X1	144 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	ACAD10	Q6JQN1	1059 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	LRRC31	Q6UY01	552 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	KDM7A	Q6ZMT4	941 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	PLEKHO2	Q8TD55	490 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	SAAL1	Q96ER3	474 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	ATP6V1G3	Q96LB4	118 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	KREMEN1	Q96MU8	473 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	ZNF302	Q9NR11	478 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	NRBP2	Q9NSY0	501 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	FAM153A	Q9UHL3	310 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	STYXL1	Q9Y6J8	313 aa		13.58	□□□□□ -0.24
SRSF5-215	ENST00000556587	KIAA1217	Q5T5P2	1943 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	TMEM150B	A6NC51	233 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	PHF2	O75151	1096 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	ATG7	O95352	703 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	PIGR	P01833	764 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	AP3M2	P53677	418 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	PSMD6	Q15008	389 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	TRIM72	Q6ZMU5	477 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	SV2A	Q7L0J3	742 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	NOP9	Q86U38	636 aa	Known RBP	13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	SLC7A3	Q8WY07	619 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	ERP44	Q9BS26	406 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	COG5	Q9UP83	839 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	PLAA	Q9Y263	795 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	PCDHB2	Q9Y5E7	798 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	SPOP	O43791	374 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	CHRNB2	P17787	502 aa		13.57	□□□□□ -0.24
SRSF5-215	ENST00000556587	CTNNA1	P35221	906 aa	Known RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms