RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 ZNF295-AS1Q8N0V1 137 aa8.64□□□□□ -1.03
PSEN1-215ENST00000556011 PGBD3Q8N328 593 aa8.64□□□□□ -1.03
PSEN1-215ENST00000556011 NSUN6Q8TEA1 469 aaKnown RBP8.64□□□□□ -1.03
PSEN1-215ENST00000556011 HMGB4Q8WW32 186 aa8.64□□□□□ -1.03
PSEN1-215ENST00000556011 LPPQ93052 612 aa8.64□□□□□ -1.03
PSEN1-215ENST00000556011 CORO1BQ9BR76 489 aa8.64□□□□□ -1.03
PSEN1-215ENST00000556011 SRCIN1Q9C0H9 1055 aa8.64□□□□□ -1.03
PSEN1-215ENST00000556011 CYP2D7A0A087X1C5 515 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 A0A1W2PNU3 283 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-215ENST00000556011 OTOL1A6NHN0 477 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-215ENST00000556011 PRR19A6NJB7 356 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 TTLL8A6PVC2 850 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 TCP11X1B4DZS4 312 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 PCDHGA12O60330 932 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 NOBOXO60393 691 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 GJA1P17302 382 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 MARK3P27448 753 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 ASIC1P78348 528 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 ADAM9Q13443 819 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 SYCP2LQ5T4T6 812 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 BHLHB9Q6PI77 547 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 PRSS55Q6UWB4 352 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-215ENST00000556011 E2F7Q96AV8 911 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 IWS1Q96ST2 819 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 P2RY13Q9BPV8 354 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 PNNQ9H307 717 aaKnown RBP8.63□□□□□ -1.03
PSEN1-215ENST00000556011 COL20A1Q9P218 1284 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 KCND3Q9UK17 655 aa8.63□□□□□ -1.03
PSEN1-215ENST00000556011 PRG3Q9Y2Y8 225 aaPredicted RBP8.63□□□□□ -1.03
PSEN1-215ENST00000556011 ZGRF1Q86YA3 2104 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 WDR19Q8NEZ3 1342 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 A0A0U1RQF3 1178 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 A0A1B0GVT2 93 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 F8W810 466 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 MOSPD3O75425 235 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 CHRM1P11229 460 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-215ENST00000556011 EIF2AK2P19525 551 aaKnown RBP8.62□□□□□ -1.03
PSEN1-215ENST00000556011 NR1D1P20393 614 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 ARID4AP29374 1257 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-215ENST00000556011 SLC6A4P31645 630 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 TRIM26Q12899 539 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-215ENST00000556011 INAVAQ3KP66 663 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 C3orf38Q5JPI3 329 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 IGF2-ASQ6U949 168 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 CLEC9AQ6UXN8 241 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 KCTD1Q719H9 257 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 CERS3Q8IU89 383 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 CLASRPQ8N2M8 674 aaKnown RBP8.62□□□□□ -1.03
PSEN1-215ENST00000556011 SLC7A3Q8WY07 619 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 CLUAP1Q96AJ1 413 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 ZNF419Q96HQ0 510 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-215ENST00000556011 PPP1R16BQ96T49 567 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 ADAMTS1Q9UHI8 967 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 MMP17Q9ULZ9 603 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 SATB2Q9UPW6 733 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 ARID1BQ8NFD5 2236 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-215ENST00000556011 TRRAPQ9Y4A5 3859 aa8.62□□□□□ -1.03
PSEN1-215ENST00000556011 MEIS3P2A8K0S8 358 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 CDRT15L2A8MXV6 281 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 SHOX2O60902 331 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-215ENST00000556011 ZNF853P0CG23 659 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 BPIP17213 487 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 SEC13P55735 322 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 PTPAQ15257 358 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 WDR45BQ5MNZ6 344 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 TEX19Q8NA77 164 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 ZSCAN1Q8NBB4 408 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 NSUN7Q8NE18 718 aaKnown RBP8.61□□□□□ -1.03
PSEN1-215ENST00000556011 CHDHQ8NE62 594 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-215ENST00000556011 GMCL1P1Q8NEA9 526 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 TRAPPC12Q8WVT3 735 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 TMEM158Q8WZ71 300 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 TBC1D5Q92609 795 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 RMDN3Q96TC7 470 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 MIR1-1HGQ9H1L0 117 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 PCDHA2Q9Y5H9 948 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 ZANQ9Y493 2812 aa8.61□□□□□ -1.03
PSEN1-215ENST00000556011 IGHV1OR15-9A0A0B4J2B8 117 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 PMS2P1A4D2B8 440 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 ZNF197O14709 1029 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 CIAO1O76071 339 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 PPP2R1AP30153 589 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 CCT8P50990 548 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 USP11P51784 963 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 ILKQ13418 452 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 KIF19Q2TAC6 998 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 LACTB2Q53H82 288 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-215ENST00000556011 KCNV1Q6PIU1 500 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 GLB1LQ6UWU2 654 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 C16orf86Q6ZW13 317 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 VASH2Q86V25 355 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 GATAD2AQ86YP4 633 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 ULK2Q8IYT8 1036 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 NME8Q8N427 588 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 ENAHQ8N8S7 591 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-215ENST00000556011 SDR42E1Q8WUS8 393 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 ABHD17AQ96GS6 310 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 NEUROD6Q96NK8 337 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 OSMRQ99650 979 aa8.6□□□□□ -1.03
PSEN1-215ENST00000556011 PLA2G12AQ9BZM1 189 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms