RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 SMAD2Q15796 467 aaKnown RBP4.24□□□□□ -1.73
LINC00648-202ENST00000555985 PUS10Q3MIT2 529 aaKnown RBP4.24□□□□□ -1.73
LINC00648-202ENST00000555985 ZNF568Q3ZCX4 644 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 ZCWPW2Q504Y3 356 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 TJAP1Q5JTD0 557 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 SCARA3Q6AZY7 606 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 ANKRD54Q6NXT1 300 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 DYMQ7RTS9 669 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 FILIP1Q7Z7B0 1213 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 LUZP1Q86V48 1076 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 LRRC8AQ8IWT6 810 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 FAM178BQ8IXR5 827 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 CMASQ8NFW8 434 aaPredicted RBP4.24□□□□□ -1.73
LINC00648-202ENST00000555985 LNX1Q8TBB1 728 aaPredicted RBP4.24□□□□□ -1.73
LINC00648-202ENST00000555985 HDAC7Q8WUI4 952 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 PIK3R5Q8WYR1 880 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 KLHL5Q96PQ7 755 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 TCF25Q9BQ70 676 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 COL25A1Q9BXS0 654 aaPredicted RBP4.24□□□□□ -1.73
LINC00648-202ENST00000555985 TRIM5Q9C035 493 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 KLK14Q9P0G3 267 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 CACNG4Q9UBN1 327 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 SERTAD1Q9UHV2 236 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 ADAM28Q9UKQ2 775 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 DENND4CQ5VZ89 1909 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 A0A1B0GVL5 298 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 CCDC189A1A4V9 331 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 LACTBL1A8MY62 500 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 LOC730098B7Z3J9 87 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 MBTPS2O43462 519 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 ZC3H11AO75152 810 aaKnown RBP eCLIP4.24□□□□□ -1.73
LINC00648-202ENST00000555985 IGFBP4P22692 258 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 CASP1P29466 404 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 CDC25BP30305 580 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 RPL9P32969 192 aaKnown RBP4.24□□□□□ -1.73
LINC00648-202ENST00000555985 ALDH7A1P49419 539 aaKnown RBP4.24□□□□□ -1.73
LINC00648-202ENST00000555985 KCNQ1P51787 676 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 CLCNKBP51801 687 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 ENPEPQ07075 957 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 STRN3Q13033 797 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 SMAD4Q13485 552 aaKnown RBP4.24□□□□□ -1.73
LINC00648-202ENST00000555985 KCNB1Q14721 858 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 CCDC85BQ15834 202 aaPredicted RBP4.24□□□□□ -1.73
LINC00648-202ENST00000555985 ARHGAP29Q52LW3 1261 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 RTP2Q5QGT7 225 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 SPATA1Q5VX52 437 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 FUT10Q6P4F1 479 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 DCLRE1AQ6PJP8 1040 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 RSPO2Q6UXX9 243 aaPredicted RBP4.24□□□□□ -1.73
LINC00648-202ENST00000555985 SLC9A9Q8IVB4 645 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 CD302Q8IX05 232 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 PLPP6Q8IY26 295 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 EFCAB13Q8IY85 973 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 THNSL1Q8IYQ7 743 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 GRAMD1CQ8IYS0 662 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 HACE1Q8IYU2 909 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 ABI1Q8IZP0 508 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 VPS52Q8N1B4 723 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 BEST2Q8NFU1 509 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 PPM1EQ8WY54 764 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 HPS3Q969F9 1004 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 C18orf25Q96B23 403 aaPredicted RBP4.24□□□□□ -1.73
LINC00648-202ENST00000555985 DHX58Q96C10 678 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 SPATA32Q96LK8 384 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 ACAP3Q96P50 834 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 RPS6KC1Q96S38 1066 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 ADPGKQ9BRR6 497 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 LRRC27Q9C0I9 530 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 FAN1Q9Y2M0 1017 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 C2CD2Q9Y426 696 aa4.24□□□□□ -1.73
LINC00648-202ENST00000555985 PTPRJQ12913 1337 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 NUP210Q8TEM1 1887 aaPredicted RBP4.23□□□□□ -1.73
LINC00648-202ENST00000555985 EIF3CLB5ME19 914 aaKnown RBP4.23□□□□□ -1.73
LINC00648-202ENST00000555985 KIAA0391O15091 583 aaKnown RBP4.23□□□□□ -1.73
LINC00648-202ENST00000555985 CLDN3O15551 220 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 TBCAO75347 108 aaKnown RBP4.23□□□□□ -1.73
LINC00648-202ENST00000555985 ABLIM3O94929 683 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 CPP00450 1065 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 CYP11A1P05108 521 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 CNPP09543 421 aaKnown RBP4.23□□□□□ -1.73
LINC00648-202ENST00000555985 CXCL8P10145 99 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 PAX3P23760 479 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 ME1P48163 572 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 ZP2Q05996 745 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 TYRO3Q06418 890 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 STK4Q13043 487 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 PSMD2Q13200 908 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 SEZ6Q53EL9 994 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 DNAJC21Q5F1R6 531 aaKnown RBP4.23□□□□□ -1.73
LINC00648-202ENST00000555985 C1orf220Q5T0J3 134 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 SLFN12LQ6IEE8 588 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 FOXR2Q6PJQ5 311 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 MMS22LQ6ZRQ5 1243 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 APBB1IPQ7Z5R6 666 aaPredicted RBP4.23□□□□□ -1.73
LINC00648-202ENST00000555985 NT5DC4Q86YG4 428 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 BRSK2Q8IWQ3 736 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 CCAR2Q8N163 923 aaKnown RBP4.23□□□□□ -1.73
LINC00648-202ENST00000555985 RNF169Q8NCN4 708 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 LRRN4CLQ8ND94 238 aa4.23□□□□□ -1.73
LINC00648-202ENST00000555985 STAMQ92783 540 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms