RNA–Protein interactions for RNA: ENST00000555572.1

NME1-NME2-203, Transcript of NME1-NME2 readthrough, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NME1-NME2, Length 1,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-NME2-203ENST00000555572 NRDE2Q9H7Z3 1164 aa15.39■□□□□ 0.05
NME1-NME2-203ENST00000555572 ALG13Q9NP73 1137 aaKnown RBP15.39■□□□□ 0.05
NME1-NME2-203ENST00000555572 DPP3Q9NY33 737 aa15.39■□□□□ 0.05
NME1-NME2-203ENST00000555572 LIMA1Q9UHB6 759 aaKnown RBP15.39■□□□□ 0.05
NME1-NME2-203ENST00000555572 R3HCC1Q9Y3T6 440 aaKnown RBP15.39■□□□□ 0.05
NME1-NME2-203ENST00000555572 MRPL42Q9Y6G3 142 aaKnown RBP15.39■□□□□ 0.05
NME1-NME2-203ENST00000555572 PTPRJQ12913 1337 aa15.39■□□□□ 0.05
NME1-NME2-203ENST00000555572 ZC3H11AO75152 810 aaKnown RBP eCLIP15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 TBX10O75333 385 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 DDHD2O94830 711 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 AFPP02771 609 aaKnown RBP15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 ITGB1P05556 798 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 DNAJB1P25685 340 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 MXI1P50539 228 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 CETN1Q12798 172 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 KCNH2Q12809 1159 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 SMAD4Q13485 552 aaKnown RBP15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 ZACNQ401N2 412 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 HSP90AA4PQ58FG1 418 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 SPOUT1Q5T280 376 aaKnown RBP15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 LMBRD2Q68DH5 695 aaPredicted RBP15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 KRT39Q6A163 491 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 TRAPPC11Q7Z392 1133 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 ZNF280BQ86YH2 543 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 OR5B17Q8NGF7 314 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 ZNF516Q92618 1163 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 C18orf25Q96B23 403 aaPredicted RBP15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 ZNF558Q96NG5 402 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 POP1Q99575 1024 aaKnown RBP15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 TUBGCP4Q9UGJ1 667 aa15.38■□□□□ 0.05
NME1-NME2-203ENST00000555572 ANO9A1A5B4 782 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 LRRC10BA6NIK2 292 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 TMEM189-UBE2V1I3L0A0 370 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 LINC01565O15544 149 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 PHACTR2O75167 634 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 C4BPAP04003 597 aaKnown RBP15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 ALDH2P05091 517 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 PPM1AP35813 382 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 PNPLA4P41247 253 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 GCLMP48507 274 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 FMO5P49326 533 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 ALDH7A1P49419 539 aaKnown RBP15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 RBP5P82980 135 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 SOX4Q06945 474 aaPredicted RBP15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 PPP3CAQ08209 521 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 BIRC3Q13489 604 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 KRT31Q15323 416 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 C15orf39Q6ZRI6 1047 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 SV2AQ7L0J3 742 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 LRRC52Q8N7C0 313 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 C1orf127Q8N9H9 656 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 ZNF560Q96MR9 790 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 COLEC11Q9BWP8 271 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 CD207Q9UJ71 328 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 FAN1Q9Y2M0 1017 aa15.37■□□□□ 0.05
NME1-NME2-203ENST00000555572 ZDBF2Q9HCK1 2354 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 GTPBP10A4D1E9 387 aaKnown RBP15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 CASTOR2A6NHX0 329 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 PODXLO00592 558 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 ITGB3P05106 788 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 ATICP31939 592 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 OR1G1P47890 313 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 COPB1P53618 953 aaKnown RBP15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 BCAR1P56945 870 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 MYL7Q01449 175 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 TRPC3Q13507 836 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 CLUL1Q15846 466 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 UPP1Q16831 310 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 VWA3BQ502W6 1294 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 TDRD10Q5VZ19 366 aaKnown RBP15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 C9orf57Q5W0N0 161 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 DCLRE1AQ6PJP8 1040 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 KCNT2Q6UVM3 1135 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 EFHBQ8N7U6 833 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 KLHL23Q8NBE8 558 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 COLGALT1Q8NBJ5 622 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 RNF214Q8ND24 703 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 FBXL13Q8NEE6 735 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 TAF4BQ92750 862 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 NDST4Q9H3R1 872 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 IGFLR1Q9H665 355 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 GOLGA2P5Q9HBQ8 144 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 CLEC1BQ9P126 229 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 DNAJB4Q9UDY4 337 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 STK39Q9UEW8 545 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 COQ4Q9Y3A0 265 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 PCDHB12Q9Y5F1 795 aa15.36■□□□□ 0.05
NME1-NME2-203ENST00000555572 PIRO00625 290 aa15.35■□□□□ 0.05
NME1-NME2-203ENST00000555572 NRP1O14786 923 aa15.35■□□□□ 0.05
NME1-NME2-203ENST00000555572 B4GALT3O60512 393 aa15.35■□□□□ 0.05
NME1-NME2-203ENST00000555572 STAU1O95793 577 aaKnown RBP15.35■□□□□ 0.05
NME1-NME2-203ENST00000555572 GALTP07902 379 aa15.35■□□□□ 0.05
NME1-NME2-203ENST00000555572 KRT19P08727 400 aa15.35■□□□□ 0.05
NME1-NME2-203ENST00000555572 POLR2BP30876 1174 aaKnown RBP15.35■□□□□ 0.05
NME1-NME2-203ENST00000555572 PIK3CAP42336 1068 aa15.35■□□□□ 0.05
NME1-NME2-203ENST00000555572 SLC11A1P49279 550 aa15.35■□□□□ 0.05
NME1-NME2-203ENST00000555572 CLCNKBP51801 687 aa15.35■□□□□ 0.05
NME1-NME2-203ENST00000555572 GUCY2FP51841 1108 aa15.35■□□□□ 0.05
NME1-NME2-203ENST00000555572 MYO1EQ12965 1108 aa15.35■□□□□ 0.05
NME1-NME2-203ENST00000555572 FILIP1LQ4L180 1135 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms