RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 GRM2Q14416 872 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 UPP1Q16831 310 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 FAM78AQ5JUQ0 283 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 ARL6IP4Q66PJ3 421 aaKnown RBP11.83□□□□□ -0.52
TDP1-212ENST00000555565 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.83□□□□□ -0.52
TDP1-212ENST00000555565 RTL10Q7L3V2 364 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 KCTD17Q8N5Z5 321 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 FAM160A2Q8N612 972 aaPredicted RBP11.83□□□□□ -0.52
TDP1-212ENST00000555565 SYT2Q8N9I0 419 aaPredicted RBP11.83□□□□□ -0.52
TDP1-212ENST00000555565 C3orf58Q8NDZ4 430 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 SPIRE2Q8WWL2 714 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 FAM3CQ92520 227 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 ZMAT2Q96NC0 199 aaKnown RBP11.83□□□□□ -0.52
TDP1-212ENST00000555565 TBC1D32Q96NH3 1257 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 TIPINQ9BVW5 301 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 CCDC94Q9BW85 323 aaPredicted RBP11.83□□□□□ -0.52
TDP1-212ENST00000555565 UPF2Q9HAU5 1272 aaKnown RBP11.83□□□□□ -0.52
TDP1-212ENST00000555565 SMC3Q9UQE7 1217 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 ARNTLO00327 626 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 MEFVO15553 781 aaPredicted RBP11.82□□□□□ -0.52
TDP1-212ENST00000555565 MCF2P10911 925 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 PLS3P13797 630 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 CNR2P34972 360 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 CCR2P41597 374 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 YARSP54577 528 aaKnown RBP11.82□□□□□ -0.52
TDP1-212ENST00000555565 TMEM119Q4V9L6 283 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 ARSHQ5FYA8 562 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 PDXDC1Q6P996 788 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 MPZL3Q6UWV2 235 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 TMEM161BQ8NDZ6 487 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 TCEAL4Q96EI5 215 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 ZBTB45Q96K62 511 aaPredicted RBP11.82□□□□□ -0.52
TDP1-212ENST00000555565 ZSWIM3Q96MP5 696 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 UROC1Q96N76 676 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 TCHPQ9BT92 498 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 TMEM121BQ9BXQ6 578 aaPredicted RBP11.82□□□□□ -0.52
TDP1-212ENST00000555565 TOPORSQ9NS56 1045 aaPredicted RBP11.82□□□□□ -0.52
TDP1-212ENST00000555565 MTRRQ9UBK8 725 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 WASF3Q9UPY6 502 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 NCANO14594 1321 aa11.82□□□□□ -0.52
TDP1-212ENST00000555565 NPHP3-ACAD11A0A0J9YXS1 232 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 ARHGEF37A1IGU5 675 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 C1QTNF9BB2RNN3 333 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 I3L4J1 428 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 FOXD2O60548 495 aaPredicted RBP11.81□□□□□ -0.52
TDP1-212ENST00000555565 MOSPD3O75425 235 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 MICAL2O94851 1124 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 C1QTNF9P0C862 333 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 PLA2G4BP0C869 781 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 MAPTP10636 758 aaKnown RBP11.81□□□□□ -0.52
TDP1-212ENST00000555565 KCNE1P15382 129 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 TKTP29401 623 aaKnown RBP11.81□□□□□ -0.52
TDP1-212ENST00000555565 BRCC3P46736 316 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 CACNB1Q02641 598 aaPredicted RBP11.81□□□□□ -0.52
TDP1-212ENST00000555565 PPP2R5DQ14738 602 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 ACAP1Q15027 740 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 SF3A2Q15428 464 aaKnown RBP11.81□□□□□ -0.52
TDP1-212ENST00000555565 LARP1BQ659C4 914 aaKnown RBP11.81□□□□□ -0.52
TDP1-212ENST00000555565 VITQ6UXI7 678 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 LONP2Q86WA8 852 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 SPEM1Q8N4L4 309 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 KDF1Q8NAX2 398 aaPredicted RBP11.81□□□□□ -0.52
TDP1-212ENST00000555565 LRRC15Q8TF66 581 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 IRF7Q92985 503 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 DDX27Q96GQ7 796 aaKnown RBP11.81□□□□□ -0.52
TDP1-212ENST00000555565 CDK5RAP3Q96JB5 506 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 ASB16Q96NS5 453 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 ACAP3Q96P50 834 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 TRMT61BQ9BVS5 477 aaKnown RBP11.81□□□□□ -0.52
TDP1-212ENST00000555565 BRD9Q9H8M2 597 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 ZFP14Q9HCL3 533 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 KCND2Q9NZV8 630 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 CNTN3Q9P232 1028 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 ZMIZ1Q9ULJ6 1067 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.81□□□□□ -0.52
TDP1-212ENST00000555565 CDY1Q9Y6F8 540 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 PIAS3Q9Y6X2 628 aa11.81□□□□□ -0.52
TDP1-212ENST00000555565 PDCD11Q14690 1871 aaKnown RBP11.8□□□□□ -0.52
TDP1-212ENST00000555565 PODXLO00592 558 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 TRAPPC3O43617 180 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 TOM1L1O75674 476 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 ABLIM3O94929 683 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 KCNK5O95279 499 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 ZNF806P0C7X5 589 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 HARSP12081 509 aaKnown RBP11.8□□□□□ -0.52
TDP1-212ENST00000555565 PTPN2P17706 415 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 PSMC3P17980 439 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 HOXA6P31267 233 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 SMTNP53814 917 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 MLLT6P55198 1093 aaPredicted RBP11.8□□□□□ -0.52
TDP1-212ENST00000555565 GRIN1Q05586 938 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 STRN3Q13033 797 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 SEZ6Q53EL9 994 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 IL31Q6EBC2 164 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 ZPBP2Q6X784 338 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 ANKS3Q6ZW76 656 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.8□□□□□ -0.52
TDP1-212ENST00000555565 C18orf25Q96B23 403 aaPredicted RBP11.8□□□□□ -0.52
TDP1-212ENST00000555565 AK8Q96MA6 479 aa11.8□□□□□ -0.52
TDP1-212ENST00000555565 LSM14BQ9BX40 385 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms