RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 GLTPD2A6NH11 291 aa25.86■■□□□ 1.73
TMEM260-207ENST00000555497 RPS6KA5O75582 802 aa25.86■■□□□ 1.73
TMEM260-207ENST00000555497 PROSCO94903 275 aa25.86■■□□□ 1.73
TMEM260-207ENST00000555497 WEE2P0C1S8 567 aa25.86■■□□□ 1.73
TMEM260-207ENST00000555497 RPL21P46778 160 aaKnown RBP25.86■■□□□ 1.73
TMEM260-207ENST00000555497 DRG2P55039 364 aaKnown RBP25.86■■□□□ 1.73
TMEM260-207ENST00000555497 SGSM1Q2NKQ1 1148 aa25.86■■□□□ 1.73
TMEM260-207ENST00000555497 ZNF394Q53GI3 561 aa25.86■■□□□ 1.73
TMEM260-207ENST00000555497 LIN9Q5TKA1 542 aa25.86■■□□□ 1.73
TMEM260-207ENST00000555497 PLEKHA7Q6IQ23 1121 aa25.86■■□□□ 1.73
TMEM260-207ENST00000555497 MS4A4AQ96JQ5 239 aa25.86■■□□□ 1.73
TMEM260-207ENST00000555497 PPP1R16BQ96T49 567 aa25.86■■□□□ 1.73
TMEM260-207ENST00000555497 NIF3L1Q9GZT8 377 aa25.86■■□□□ 1.73
TMEM260-207ENST00000555497 PNMA3Q9UL41 463 aa25.86■■□□□ 1.73
TMEM260-207ENST00000555497 MTUS1Q9ULD2 1270 aa25.86■■□□□ 1.73
TMEM260-207ENST00000555497 BRD2P25440 801 aaKnown RBP25.85■■□□□ 1.73
TMEM260-207ENST00000555497 SLC1A1P43005 524 aa25.85■■□□□ 1.73
TMEM260-207ENST00000555497 LEKR1Q6ZMV7 388 aa25.85■■□□□ 1.73
TMEM260-207ENST00000555497 VCPIP1Q96JH7 1222 aa25.85■■□□□ 1.73
TMEM260-207ENST00000555497 BTBD19C9JJ37 291 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 GPR25O00155 361 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 MEFVO15553 781 aaPredicted RBP25.84■■□□□ 1.73
TMEM260-207ENST00000555497 PPFIA2O75334 1257 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 CXCL8P10145 99 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 PLTPP55058 493 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 ZNF844Q08AG5 666 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 SURF1Q15526 300 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 FOXR1Q6PIV2 292 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 SCARA5Q6ZMJ2 495 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 C12orf50Q8NA57 414 aaPredicted RBP25.84■■□□□ 1.73
TMEM260-207ENST00000555497 FBXO25Q8TCJ0 367 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 TMBIM4Q9HC24 238 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 RASAL2Q9UJF2 1139 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 TNFSF13BQ9Y275 285 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 B4GALT4O60513 344 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 TAS2R40P59535 323 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 C1QBPQ07021 282 aaKnown RBP25.84■■□□□ 1.73
TMEM260-207ENST00000555497 TRPC3Q13507 836 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 LAMC2Q13753 1193 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 TMEM132AQ24JP5 1023 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 AFG1LQ8WV93 481 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 C1orf54Q8WWF1 131 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 LRRC4CQ9HCJ2 640 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 PTPN22Q9Y2R2 807 aa25.84■■□□□ 1.73
TMEM260-207ENST00000555497 ASAP2O43150 1006 aa25.83■■□□□ 1.73
TMEM260-207ENST00000555497 TMEM191BP0C7N4 346 aa25.83■■□□□ 1.73
TMEM260-207ENST00000555497 ZNF286BP0CG31 522 aa25.83■■□□□ 1.73
TMEM260-207ENST00000555497 ADCYAP1R1P41586 468 aa25.83■■□□□ 1.73
TMEM260-207ENST00000555497 ASPAP45381 313 aa25.83■■□□□ 1.73
TMEM260-207ENST00000555497 CCDC105Q8IYK2 499 aa25.83■■□□□ 1.73
TMEM260-207ENST00000555497 TFAP2BQ92481 460 aa25.83■■□□□ 1.73
TMEM260-207ENST00000555497 ATP6V1G3Q96LB4 118 aa25.83■■□□□ 1.73
TMEM260-207ENST00000555497 KATNBL1Q9H079 304 aa25.83■■□□□ 1.73
TMEM260-207ENST00000555497 ATP8A1Q9Y2Q0 1164 aa25.83■■□□□ 1.73
TMEM260-207ENST00000555497 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.83■■□□□ 1.72
TMEM260-207ENST00000555497 MMP8P22894 467 aa25.83■■□□□ 1.72
TMEM260-207ENST00000555497 IRAK1P51617 712 aa25.83■■□□□ 1.72
TMEM260-207ENST00000555497 ZNF484Q5JVG2 852 aa25.83■■□□□ 1.72
TMEM260-207ENST00000555497 TTC19Q6DKK2 380 aaPredicted RBP25.83■■□□□ 1.72
TMEM260-207ENST00000555497 LINC01465Q8N7H1 131 aa25.83■■□□□ 1.72
TMEM260-207ENST00000555497 C1orf131Q8NDD1 294 aaKnown RBP25.83■■□□□ 1.72
TMEM260-207ENST00000555497 LRRC19Q9H756 370 aa25.83■■□□□ 1.72
TMEM260-207ENST00000555497 POLIQ9UNA4 740 aa25.83■■□□□ 1.72
TMEM260-207ENST00000555497 A0A087WZ62 844 aa25.82■■□□□ 1.72
TMEM260-207ENST00000555497 GH1P01241 217 aa25.82■■□□□ 1.72
TMEM260-207ENST00000555497 SKOR1P84550 965 aa25.82■■□□□ 1.72
TMEM260-207ENST00000555497 MTMR3Q13615 1198 aa25.82■■□□□ 1.72
TMEM260-207ENST00000555497 AMHR2Q16671 573 aa25.82■■□□□ 1.72
TMEM260-207ENST00000555497 ZNF699Q32M78 642 aa25.82■■□□□ 1.72
TMEM260-207ENST00000555497 MAP1SQ66K74 1059 aaPredicted RBP25.82■■□□□ 1.72
TMEM260-207ENST00000555497 FDXACB1Q9BRP7 624 aaPredicted RBP25.82■■□□□ 1.72
TMEM260-207ENST00000555497 EPB41L4BQ9H329 900 aa25.82■■□□□ 1.72
TMEM260-207ENST00000555497 PODXLO00592 558 aa25.82■■□□□ 1.72
TMEM260-207ENST00000555497 RPL7AP62424 266 aaKnown RBP25.82■■□□□ 1.72
TMEM260-207ENST00000555497 CCNA1P78396 465 aa25.82■■□□□ 1.72
TMEM260-207ENST00000555497 WDTC1Q8N5D0 677 aa25.82■■□□□ 1.72
TMEM260-207ENST00000555497 CAPS2Q9BXY5 557 aa25.82■■□□□ 1.72
TMEM260-207ENST00000555497 MRPL47Q9HD33 250 aaKnown RBP25.82■■□□□ 1.72
TMEM260-207ENST00000555497 CHST7Q9NS84 486 aa25.82■■□□□ 1.72
TMEM260-207ENST00000555497 CALCOCO1Q9P1Z2 691 aa25.82■■□□□ 1.72
TMEM260-207ENST00000555497 SIX4Q9UIU6 781 aa25.82■■□□□ 1.72
TMEM260-207ENST00000555497 SCN4AP35499 1836 aa25.81■■□□□ 1.72
TMEM260-207ENST00000555497 RBM47A0AV96 593 aaKnown RBP25.81■■□□□ 1.72
TMEM260-207ENST00000555497 TLR3O15455 904 aaKnown RBP25.81■■□□□ 1.72
TMEM260-207ENST00000555497 SNAI1O95863 264 aaPredicted RBP25.81■■□□□ 1.72
TMEM260-207ENST00000555497 FNTAP49354 379 aa25.81■■□□□ 1.72
TMEM260-207ENST00000555497 ATP1A2P50993 1020 aa25.81■■□□□ 1.72
TMEM260-207ENST00000555497 SNX1Q13596 522 aa25.81■■□□□ 1.72
TMEM260-207ENST00000555497 BRI3BPQ8WY22 251 aa25.81■■□□□ 1.72
TMEM260-207ENST00000555497 NFKBIZQ9BYH8 718 aa25.81■■□□□ 1.72
TMEM260-207ENST00000555497 VTA1Q9NP79 307 aa25.81■■□□□ 1.72
TMEM260-207ENST00000555497 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.81■■□□□ 1.72
TMEM260-207ENST00000555497 TNNC2P02585 160 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 VTNP04004 478 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 NFICP08651 508 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 ANKS1BQ7Z6G8 1248 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 PPTC7Q8NI37 304 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 FEZF2Q8TBJ5 459 aa25.8■■□□□ 1.72
TMEM260-207ENST00000555497 GTF3C2Q8WUA4 911 aaPredicted RBP25.8■■□□□ 1.72
TMEM260-207ENST00000555497 ATG4AQ8WYN0 398 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms