RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ARPP19P56211 112 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 DPYDQ12882 1025 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 SNW1Q13573 536 aaKnown RBP14.8□□□□□ -0.04
SNX6-203ENST00000555416 CTXN3Q4LDR2 81 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 C15orf39Q6ZRI6 1047 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 FMR1NBQ8N0W7 255 aaPredicted RBP14.8□□□□□ -0.04
SNX6-203ENST00000555416 C1orf127Q8N9H9 656 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 OR5B17Q8NGF7 314 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 HDAC7Q8WUI4 952 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 SMG7Q92540 1137 aaKnown RBP14.8□□□□□ -0.04
SNX6-203ENST00000555416 BORCS6Q96GS4 357 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 SENP8Q96LD8 212 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 NECTIN4Q96NY8 510 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 GZF1Q9H116 711 aaPredicted RBP14.8□□□□□ -0.04
SNX6-203ENST00000555416 EXOC1Q9NV70 894 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 UBE4BO95155 1302 aa14.8□□□□□ -0.04
SNX6-203ENST00000555416 CCL16O15467 120 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 ABLIM3O94929 683 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 SEC24AO95486 1093 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 VNN2O95498 520 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 C8AP07357 584 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 OR4Q2P0C623 313 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 TSC2P49815 1807 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 CDR1P51861 262 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 NTHL1P78549 312 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 TFAMQ00059 246 aaKnown RBP14.79□□□□□ -0.04
SNX6-203ENST00000555416 KNOP1Q1ED39 458 aaKnown RBP14.79□□□□□ -0.04
SNX6-203ENST00000555416 DSTYKQ6XUX3 929 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 RDH13Q8NBN7 331 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 ENGASEQ8NFI3 743 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 SLC7A14Q8TBB6 771 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 TMEM209Q96SK2 561 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 PRKD2Q9BZL6 878 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 ZDHHC7Q9NXF8 308 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 SIX4Q9UIU6 781 aa14.79□□□□□ -0.04
SNX6-203ENST00000555416 OAZ2O95190 189 aa14.78□□□□□ -0.04
SNX6-203ENST00000555416 POLR2BP30876 1174 aaKnown RBP14.78□□□□□ -0.04
SNX6-203ENST00000555416 APPL2Q8NEU8 664 aa14.78□□□□□ -0.04
SNX6-203ENST00000555416 PLEKHO2Q8TD55 490 aa14.78□□□□□ -0.04
SNX6-203ENST00000555416 ERCC4Q92889 916 aaPredicted RBP14.78□□□□□ -0.04
SNX6-203ENST00000555416 RTP3Q9BQQ7 232 aa14.78□□□□□ -0.04
SNX6-203ENST00000555416 MTMR12Q9C0I1 747 aa14.78□□□□□ -0.04
SNX6-203ENST00000555416 KCTD10Q9H3F6 313 aa14.78□□□□□ -0.04
SNX6-203ENST00000555416 SMOC2Q9H3U7 446 aa14.78□□□□□ -0.04
SNX6-203ENST00000555416 WDR6Q9NNW5 1121 aaKnown RBP14.78□□□□□ -0.04
SNX6-203ENST00000555416 HCFC1R1Q9NWW0 138 aa14.78□□□□□ -0.04
SNX6-203ENST00000555416 NOTCH4Q99466 2003 aa14.77□□□□□ -0.04
SNX6-203ENST00000555416 CLUHO75153 1309 aa14.77□□□□□ -0.04
SNX6-203ENST00000555416 ZNF233A6NK53 670 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 H7C4K7 107 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 KIAA0391O15091 583 aaKnown RBP14.77□□□□□ -0.05
SNX6-203ENST00000555416 DCXO43602 365 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 GADD45BO75293 160 aaPredicted RBP14.77□□□□□ -0.05
SNX6-203ENST00000555416 RHOBTB3O94955 611 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 ITGB3P05106 788 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 ASGR2P07307 311 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 YWHAHQ04917 246 aaPredicted RBP14.77□□□□□ -0.05
SNX6-203ENST00000555416 PNOCQ13519 176 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 SNRNP35Q16560 246 aaKnown RBP14.77□□□□□ -0.05
SNX6-203ENST00000555416 PPM1LQ5SGD2 360 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 LIN9Q5TKA1 542 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 ZNF280DQ6N043 979 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 RNF19BQ6ZMZ0 732 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 CCDC149Q6ZUS6 474 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 GRASPQ7Z6J2 395 aaPredicted RBP14.77□□□□□ -0.05
SNX6-203ENST00000555416 XXYLT1Q8NBI6 393 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 OR10T2Q8NGX3 314 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 ZNF461Q8TAF7 563 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 MYADMQ96S97 322 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 RHOBTB2Q9BYZ6 727 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 CRISPLD1Q9H336 500 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 INTS13Q9NVM9 706 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 LIMD1Q9UGP4 676 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 DPP7Q9UHL4 492 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 AGAP1Q9UPQ3 857 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 MAPK8IP1Q9UQF2 711 aa14.77□□□□□ -0.05
SNX6-203ENST00000555416 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.77□□□□□ -0.05
SNX6-203ENST00000555416 NRG2O14511 850 aaPredicted RBP14.76□□□□□ -0.05
SNX6-203ENST00000555416 CYB561D2O14569 222 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 CYP11A1P05108 521 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 MYL1P05976 194 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 HNRNPA1P09651 372 aaKnown RBP eCLIP14.76□□□□□ -0.05
SNX6-203ENST00000555416 ATF2P15336 505 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 TYMPP19971 482 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 CASP4P49662 377 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 TAF6P49848 677 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 CYP24A1Q07973 514 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 ADCY1Q08828 1119 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 PSMD2Q13200 908 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 WSCD1Q658N2 575 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 OVOS1Q6IE37 1185 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 HS2ST1Q7LGA3 356 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 NT5DC4Q86YG4 428 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 C12orf56Q8IXR9 622 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 SMYD4Q8IYR2 804 aaPredicted RBP14.76□□□□□ -0.05
SNX6-203ENST00000555416 CSGALNACT2Q8N6G5 542 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 TDRD5Q8NAT2 981 aaKnown RBP14.76□□□□□ -0.05
SNX6-203ENST00000555416 ST13P5Q8NFI4 369 aaPredicted RBP14.76□□□□□ -0.05
SNX6-203ENST00000555416 ZNF516Q92618 1163 aa14.76□□□□□ -0.05
SNX6-203ENST00000555416 PGLYRP2Q96PD5 576 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms