RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 COL13A1Q5TAT6 717 aaPredicted RBP10.92□□□□□ -0.66
NEK9-205ENST00000555405 VPS36Q86VN1 386 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 TRIM43Q96BQ3 446 aaPredicted RBP10.92□□□□□ -0.66
NEK9-205ENST00000555405 ZBED2Q9BTP6 218 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 NIF3L1Q9GZT8 377 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 TSPYL2Q9H2G4 693 aaPredicted RBP10.92□□□□□ -0.66
NEK9-205ENST00000555405 FAM49BQ9NUQ9 324 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 PPP2R2CQ9Y2T4 447 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 A0A087X0T9 212 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 ABL1P00519 1130 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 SERPING1P05155 500 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 RPLP2P05387 115 aaKnown RBP10.92□□□□□ -0.66
NEK9-205ENST00000555405 FAM228BP0C875 321 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 BRD2P25440 801 aaKnown RBP10.92□□□□□ -0.66
NEK9-205ENST00000555405 ARPP19P56211 112 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 ZNF280BQ86YH2 543 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 USP38Q8NB14 1042 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 RBBP8NLQ8NC74 664 aaPredicted RBP10.92□□□□□ -0.66
NEK9-205ENST00000555405 KIAA1524Q8TCG1 905 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 DNAJC7Q99615 494 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 MYO1AQ9UBC5 1043 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 LAMA3Q16787 3333 aa10.92□□□□□ -0.66
NEK9-205ENST00000555405 ASS1P00966 412 aaKnown RBP10.91□□□□□ -0.66
NEK9-205ENST00000555405 CCDC175P0C221 793 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 FERP16591 822 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 IKBKEQ14164 716 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 PCBP1Q15365 356 aaKnown RBP eCLIP10.91□□□□□ -0.66
NEK9-205ENST00000555405 ZNF710Q8N1W2 664 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 LINC01599Q8WXQ3 324 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 ST7Q9NRC1 585 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 DUSP10Q9Y6W6 482 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 A8MXQ7 604 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 BUB1O43683 1085 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 MMEP08473 750 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 ATF7P17544 494 aaPredicted RBP10.91□□□□□ -0.66
NEK9-205ENST00000555405 PDE6CP51160 858 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 AP3M2P53677 418 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 GPNMBQ14956 572 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 FIGNQ5HY92 759 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 TRAF7Q6Q0C0 670 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 RPAINQ86UA6 219 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 TMEM139Q8IV31 216 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 BADQ92934 168 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 COQ4Q9Y3A0 265 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 P4HA1P13674 534 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 C9orf57Q5W0N0 161 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 IRF2BP2Q7Z5L9 587 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 ACOT1Q86TX2 421 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 PALB2Q86YC2 1186 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 PACSIN1Q9BY11 444 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 PLEKHA5Q9HAU0 1116 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 HMGXB4Q9UGU5 601 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 C2CD2Q9Y426 696 aa10.91□□□□□ -0.66
NEK9-205ENST00000555405 A0A1W2PQJ5 194 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 PODXLO00592 558 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 CYB561D2O14569 222 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 SPTLC1O15269 473 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 HUS1O60921 280 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 CCDC172P0C7W6 258 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 GNA15P30679 374 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 CLCN1P35523 988 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 PSMC1P62191 440 aaKnown RBP10.9□□□□□ -0.66
NEK9-205ENST00000555405 ALKBH5Q6P6C2 394 aaKnown RBP10.9□□□□□ -0.66
NEK9-205ENST00000555405 C15orf39Q6ZRI6 1047 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 ANKRD33Q7Z3H0 272 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 CD302Q8IX05 232 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 C12orf29Q8N999 325 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 URGCPQ8TCY9 931 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 CPA5Q8WXQ8 436 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 B3GALT6Q96L58 329 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 SNX25Q9H3E2 840 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 RRAGDQ9NQL2 400 aaPredicted RBP10.9□□□□□ -0.66
NEK9-205ENST00000555405 DNAJB4Q9UDY4 337 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 TMEM110-MUSTN1A8MSY1 372 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 KPNA7A9QM74 516 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 C9IYK1 514 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 PITPNM1O00562 1244 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 CFHP08603 1231 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 COL6A1P12109 1028 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 TAF6P49848 677 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 NDST1P52848 882 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 GNG11P61952 73 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 CCDC142Q17RM4 750 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 HS1BP3Q53T59 392 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 NOMO2Q5JPE7 1267 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 NOP9Q86U38 636 aaKnown RBP10.9□□□□□ -0.66
NEK9-205ENST00000555405 MRPL45Q9BRJ2 306 aaKnown RBP10.9□□□□□ -0.66
NEK9-205ENST00000555405 SDCBP2Q9H190 292 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 NUCKS1Q9H1E3 243 aaKnown RBP10.9□□□□□ -0.66
NEK9-205ENST00000555405 PRDM10Q9NQV6 1147 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 TAS2R14Q9NYV8 317 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 ITGA11Q9UKX5 1188 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 GIT1Q9Y2X7 761 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 ADGRG1Q9Y653 693 aa10.9□□□□□ -0.66
NEK9-205ENST00000555405 C2CD2LO14523 706 aa10.9□□□□□ -0.67
NEK9-205ENST00000555405 RAB27AP51159 221 aa10.9□□□□□ -0.67
NEK9-205ENST00000555405 PTPN14Q15678 1187 aa10.9□□□□□ -0.67
NEK9-205ENST00000555405 PLEKHG4Q58EX7 1191 aa10.9□□□□□ -0.67
NEK9-205ENST00000555405 FAM26DQ5JW98 314 aa10.9□□□□□ -0.67
NEK9-205ENST00000555405 WSCD1Q658N2 575 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms