RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SLC44A3Q8N4M1 653 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 PDILTQ8N807 584 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 LEMD2Q8NC56 503 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 PANK2Q9BZ23 570 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 TRIM9Q9C026 710 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 GDE1Q9NZC3 331 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 HSFX1Q9UBD0 423 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 RCOR1Q9UKL0 485 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 DSEQ9UL01 958 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 DOCK8Q8NF50 2099 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 PRRG1O14668 218 aa12.82□□□□□ -0.36
VRK1-204ENST00000555351 CCL16O15467 120 aa12.82□□□□□ -0.36
VRK1-204ENST00000555351 NFICP08651 508 aa12.82□□□□□ -0.36
VRK1-204ENST00000555351 MYBP10242 640 aa12.82□□□□□ -0.36
VRK1-204ENST00000555351 PTPN5P54829 565 aa12.82□□□□□ -0.36
VRK1-204ENST00000555351 SNRPFP62306 86 aaKnown RBP12.82□□□□□ -0.36
VRK1-204ENST00000555351 SPAG1Q07617 926 aa12.82□□□□□ -0.36
VRK1-204ENST00000555351 GPR17Q13304 367 aa12.82□□□□□ -0.36
VRK1-204ENST00000555351 DSTYKQ6XUX3 929 aa12.82□□□□□ -0.36
VRK1-204ENST00000555351 SYCP3Q8IZU3 236 aa12.82□□□□□ -0.36
VRK1-204ENST00000555351 FGF13Q92913 245 aa12.82□□□□□ -0.36
VRK1-204ENST00000555351 C7orf25Q9BPX7 421 aa12.82□□□□□ -0.36
VRK1-204ENST00000555351 SLC2A4RGQ9NR83 387 aa12.82□□□□□ -0.36
VRK1-204ENST00000555351 FAM13BQ9NYF5 915 aa12.82□□□□□ -0.36
VRK1-204ENST00000555351 DNMT3BQ9UBC3 853 aaKnown RBP12.82□□□□□ -0.36
VRK1-204ENST00000555351 INSL5Q9Y5Q6 135 aa12.82□□□□□ -0.36
VRK1-204ENST00000555351 TISP43B9A030 160 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 ZNF197O14709 1029 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 EXTL3O43909 919 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 CPB1P15086 417 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 PNPLA4P41247 253 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 TAF6P49848 677 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 CASP5P51878 434 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 EPHA5P54756 1037 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 KCNA1Q09470 495 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 SMARCB1Q12824 385 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 PLD1Q13393 1074 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 RESP18Q5W5W9 173 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 ASTLQ6HA08 431 aaPredicted RBP12.81□□□□□ -0.36
VRK1-204ENST00000555351 OVOS1Q6IE37 1185 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 BRSK2Q8IWQ3 736 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 ELMOD1Q8N336 334 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 CACTINQ8WUQ7 758 aaKnown RBP12.81□□□□□ -0.36
VRK1-204ENST00000555351 FAM212AQ96EL1 285 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 SENP8Q96LD8 212 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 CYP4F11Q9HBI6 524 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 KIAA1586Q9HCI6 787 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 DPP3Q9NY33 737 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 TBC1D7Q9P0N9 293 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 PCDHA7Q9UN72 937 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 POLIQ9UNA4 740 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 UBE4BO95155 1302 aa12.81□□□□□ -0.36
VRK1-204ENST00000555351 PVALEFA0A1B0GWK0 134 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 SEC24AO95486 1093 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 RHOP08100 348 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 ME1P48163 572 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 GUCY2FP51841 1108 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 ARPP19P56211 112 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 NHLH1Q02575 133 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 EHHADHQ08426 723 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 ADCY1Q08828 1119 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 SURF1Q15526 300 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 SV2CQ496J9 727 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 UNC13DQ70J99 1090 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 EPM2AIP1Q7L775 607 aaPredicted RBP12.8□□□□□ -0.36
VRK1-204ENST00000555351 NPAS3Q8IXF0 933 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 ITFG1Q8TB96 612 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 SPATA18Q8TC71 538 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 ZNF507Q8TCN5 953 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 DHX58Q96C10 678 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 ZNF560Q96MR9 790 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 RTP3Q9BQQ7 232 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 FAM213AQ9BRX8 229 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 MFSD1Q9H3U5 465 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 SMOC2Q9H3U7 446 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 HCFC1R1Q9NWW0 138 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 RBAKQ9NYW8 714 aaPredicted RBP12.8□□□□□ -0.36
VRK1-204ENST00000555351 CGNQ9P2M7 1197 aaKnown RBP12.8□□□□□ -0.36
VRK1-204ENST00000555351 USP25Q9UHP3 1055 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 FBXL21Q9UKT6 434 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 MRPS23Q9Y3D9 190 aaKnown RBP12.8□□□□□ -0.36
VRK1-204ENST00000555351 ASB3Q9Y575 518 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 NUMBLQ9Y6R0 609 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 TSC2P49815 1807 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 MUC6Q6W4X9 2439 aa12.8□□□□□ -0.36
VRK1-204ENST00000555351 NOTCH4Q99466 2003 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 PPEF2O14830 753 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 SPTLC1O15269 473 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 POLR2DO15514 142 aaKnown RBP12.79□□□□□ -0.36
VRK1-204ENST00000555351 ECI2O75521 394 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 PDGFBP01127 241 aaPredicted RBP12.79□□□□□ -0.36
VRK1-204ENST00000555351 AOC1P19801 751 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 VCPP55072 806 aaKnown RBP12.79□□□□□ -0.36
VRK1-204ENST00000555351 ASIC1P78348 528 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 NTHL1P78549 312 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 PRSS36Q5K4E3 855 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 FAM26FQ5R3K3 315 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 CYP4A22Q5TCH4 519 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 IQCEQ6IPM2 695 aa12.79□□□□□ -0.36
VRK1-204ENST00000555351 PHLDB3Q6NSJ2 640 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms