RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 CD302Q8IX05 232 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 SYCE1Q8N0S2 351 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 ANKRD36BP1Q96IX9 119 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 OSMRQ99650 979 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 TCHPQ9BT92 498 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 PLEKHA5Q9HAU0 1116 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 CISHQ9NSE2 258 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 NME7Q9Y5B8 376 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 ATMINO43313 823 aaPredicted RBP9.52□□□□□ -0.89
TDP1-210ENST00000554976 CTNNA2P26232 953 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 PEX5P50542 639 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 CRYBB1P53674 252 aaPredicted RBP9.52□□□□□ -0.89
TDP1-210ENST00000554976 BPIFB4P59827 614 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 TMEM62Q0P6H9 643 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 INCA1Q0VD86 236 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 PDCL2Q8N4E4 241 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 GCOM2Q9BZD3 368 aaPredicted RBP9.52□□□□□ -0.89
TDP1-210ENST00000554976 AP5M1Q9H0R1 490 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 FAM124BQ9H5Z6 455 aaPredicted RBP9.52□□□□□ -0.89
TDP1-210ENST00000554976 ITGA11Q9UKX5 1188 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 PCDHB4Q9Y5E5 795 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 PCNTO95613 3336 aa9.52□□□□□ -0.89
TDP1-210ENST00000554976 TDRD15B5MCY1 1934 aaKnown RBP9.51□□□□□ -0.89
TDP1-210ENST00000554976 CCDC66A2RUB6 948 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 NPTXRO95502 500 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 GNA15P30679 374 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 USP8P40818 1118 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 GSCP56915 257 aaPredicted RBP9.51□□□□□ -0.89
TDP1-210ENST00000554976 TFAMQ00059 246 aaKnown RBP9.51□□□□□ -0.89
TDP1-210ENST00000554976 GABPB1Q06547 395 aaPredicted RBP9.51□□□□□ -0.89
TDP1-210ENST00000554976 GDF6Q6KF10 455 aaPredicted RBP9.51□□□□□ -0.89
TDP1-210ENST00000554976 CC2D1AQ6P1N0 951 aaPredicted RBP9.51□□□□□ -0.89
TDP1-210ENST00000554976 TMEM270Q6UE05 265 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 TRIM72Q6ZMU5 477 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 CPNE8Q86YQ8 564 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 USP38Q8NB14 1042 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 SMG8Q8ND04 991 aaKnown RBP9.51□□□□□ -0.89
TDP1-210ENST00000554976 TFAP2BQ92481 460 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 RUBCNQ92622 972 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 CYFIP2Q96F07 1278 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 PBKQ96KB5 322 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 RPS6KC1Q96S38 1066 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 MTG1Q9BT17 334 aaPredicted RBP9.51□□□□□ -0.89
TDP1-210ENST00000554976 TSPYL1Q9H0U9 437 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 CREBZFQ9NS37 354 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 NLRC5Q86WI3 1866 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 TNNC2P02585 160 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 TMEM191BP0C7N4 346 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 KRT5P13647 590 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 EIF4BP23588 611 aaKnown RBP9.51□□□□□ -0.89
TDP1-210ENST00000554976 RAD23BP54727 409 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 ZNF699Q32M78 642 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 PPP1R15BQ5SWA1 713 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 FAM228AQ86W67 206 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 VCPIP1Q96JH7 1222 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 CAPNS2Q96L46 248 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 TWNKQ96RR1 684 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 SENP6Q9GZR1 1112 aaPredicted RBP9.51□□□□□ -0.89
TDP1-210ENST00000554976 RBM12Q9NTZ6 932 aaKnown RBP9.51□□□□□ -0.89
TDP1-210ENST00000554976 UVRAGQ9P2Y5 699 aa9.51□□□□□ -0.89
TDP1-210ENST00000554976 CILPO75339 1184 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 ERLIN2O94905 339 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 ITGB3P05106 788 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 MYBL1P10243 752 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 TNFRSF8P28908 595 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 VSNL1P62760 191 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 MFSD14CQ5VZR4 134 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 PLEKHA7Q6IQ23 1121 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 DAAM2Q86T65 1068 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 SERINC5Q86VE9 423 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 ZNF606Q8WXB4 792 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 ALG3Q92685 438 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 ACAP3Q96P50 834 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 PSMB7Q99436 277 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 FAM49AQ9H0Q0 323 aaPredicted RBP9.5□□□□□ -0.89
TDP1-210ENST00000554976 HMGXB4Q9UGU5 601 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 TULP2O00295 520 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 CTNNA1P35221 906 aaKnown RBP9.5□□□□□ -0.89
TDP1-210ENST00000554976 RAP1GAPP47736 663 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 PSEN1P49768 467 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 TMEM132DQ14C87 1099 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 RPS6KA1Q15418 735 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 TRIM71Q2Q1W2 868 aaKnown RBP9.5□□□□□ -0.89
TDP1-210ENST00000554976 NOTUMQ6P988 496 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 SLC4A11Q8NBS3 891 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 NUP85Q9BW27 656 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 UBXN6Q9BZV1 441 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 SMYD3Q9H7B4 428 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 SNTG2Q9NY99 539 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 CHORDC1Q9UHD1 332 aaPredicted RBP9.5□□□□□ -0.89
TDP1-210ENST00000554976 CYTH4Q9UIA0 394 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 ALG6Q9Y672 507 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 PTPRDP23468 1912 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 CCDC151A5D8V7 595 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 PHACTR2O75167 634 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 LSM8O95777 96 aaKnown RBP9.5□□□□□ -0.89
TDP1-210ENST00000554976 CHRNA1P02708 482 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 PAEPP09466 180 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 KCNE1P15382 129 aa9.5□□□□□ -0.89
TDP1-210ENST00000554976 MMP8P22894 467 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms