RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 XRCC4Q13426 336 aa13.42□□□□□ -0.26
PPP4R3A-206ENST00000554943 IFNLR1Q8IU57 520 aaPredicted RBP13.42□□□□□ -0.26
PPP4R3A-206ENST00000554943 ARFGAP1Q8N6T3 406 aa13.42□□□□□ -0.26
PPP4R3A-206ENST00000554943 ELMO3Q96BJ8 720 aa13.42□□□□□ -0.26
PPP4R3A-206ENST00000554943 FAM84AQ96KN4 292 aa13.42□□□□□ -0.26
PPP4R3A-206ENST00000554943 FOXP3Q9BZS1 431 aa13.42□□□□□ -0.26
PPP4R3A-206ENST00000554943 ZNF302Q9NR11 478 aa13.42□□□□□ -0.26
PPP4R3A-206ENST00000554943 BTBD7Q9P203 1132 aa13.42□□□□□ -0.26
PPP4R3A-206ENST00000554943 EFR3BQ9Y2G0 817 aa13.42□□□□□ -0.26
PPP4R3A-206ENST00000554943 HNRNPDLO14979 420 aaKnown RBP13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 DNAJC8O75937 253 aaPredicted RBP13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 TGFB3P10600 412 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 COPS2P61201 443 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 OGDHQ02218 1023 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 LLGL2Q6P1M3 1020 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 TSHZ1Q6ZSZ6 1077 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 EPS8L3Q8TE67 593 aaKnown RBP13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 MAML1Q92585 1016 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 CHMP6Q96FZ7 201 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 ZBTB45Q96K62 511 aaPredicted RBP13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 ACO2Q99798 780 aaKnown RBP13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 DHRS4Q9BTZ2 278 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 ZNF518BQ9C0D4 1074 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 VRTNQ9H8Y1 702 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 HOXC10Q9NYD6 342 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 ANAPC7Q9UJX3 599 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 MTUS1Q9ULD2 1270 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 ZMYND8Q9ULU4 1186 aaPredicted RBP13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 MAGEB2O15479 319 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 CHN1P15882 459 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 GABRB2P47870 512 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 HMGCS2P54868 508 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 SPOPLQ6IQ16 392 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 RGS9BPQ6ZS82 235 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 ATL2Q8NHH9 583 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 MAGEC3Q8TD91 643 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 IPO4Q8TEX9 1081 aaKnown RBP13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 SLITRK1Q96PX8 696 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 FARP1Q9Y4F1 1045 aaPredicted RBP13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 LIASO43766 372 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 DLATP10515 647 aaKnown RBP13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 DENND2CQ68D51 928 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 CGB2Q6NT52 195 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 ZCCHC9Q8N567 271 aaKnown RBP13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 CPA5Q8WXQ8 436 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 NKD2Q969F2 451 aaPredicted RBP13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 TRAIPQ9BWF2 469 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 FZD8Q9H461 694 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 C1orf112Q9NSG2 853 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 FETUBQ9UGM5 382 aa13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 SEPT9Q9UHD8 586 aaPredicted RBP13.41□□□□□ -0.26
PPP4R3A-206ENST00000554943 LOC102724159A0A0B4J2E5 919 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 GOLGA6L10A6NI86 522 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 ENDOD1O94919 500 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 MAPK4P31152 587 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 KCNJ1P48048 391 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 SLC25A11Q02978 314 aaKnown RBP13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 MPP2Q14168 576 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 PWP2Q15269 919 aaKnown RBP13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 KRT71Q3SY84 523 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 ADAT2Q7Z6V5 191 aaKnown RBP13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 TRPM4Q8TD43 1214 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 DENND1AQ8TEH3 1009 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 DDX23Q9BUQ8 820 aaKnown RBP13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 LHX5Q9H2C1 402 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 AZI2Q9H6S1 392 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 B4GALT4O60513 344 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 CST3P01034 146 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 POU5F1BQ06416 359 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 FAM187BQ17R55 369 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 WDR72Q3MJ13 1102 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 CCDC62Q6P9F0 684 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 NSMFQ6X4W1 530 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 CYP4V2Q6ZWL3 525 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 PLPPR4Q7Z2D5 763 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 POLNQ7Z5Q5 900 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 MDM1Q8TC05 714 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 NINJ2Q9NZG7 142 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 CD2APQ9Y5K6 639 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 A0A0G2JLL6 359 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 GAS2O43903 313 aaKnown RBP13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 ARSEP51690 589 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 STXBP2Q15833 593 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 GNPTABQ3T906 1256 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 PRRT2Q7Z6L0 340 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 RHOT1Q8IXI2 618 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 ALLCQ8N6M5 410 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 ANKS4BQ8N8V4 417 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 ANKLE1Q8NAG6 615 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 FEZF2Q8TBJ5 459 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 FNIP1Q8TF40 1166 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 MZB1Q8WU39 189 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 WRNIP1Q96S55 665 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 FAM124BQ9H5Z6 455 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 ACTR5Q9H9F9 607 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 RBAKQ9NYW8 714 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 GPRC5DQ9NZD1 345 aa13.4□□□□□ -0.26
PPP4R3A-206ENST00000554943 E7EVH7 732 aa13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 WEE2P0C1S8 567 aa13.39□□□□□ -0.27
PPP4R3A-206ENST00000554943 TCF4P15884 667 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms